RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 GTF2H4Q92759 462 aa7.78□□□□□ -1.16
NEDD8-206ENST00000531430 MARS2Q96GW9 593 aaKnown RBP7.78□□□□□ -1.16
NEDD8-206ENST00000531430 ARHGDIGQ99819 225 aa7.78□□□□□ -1.16
NEDD8-206ENST00000531430 PAIP1Q9H074 479 aaKnown RBP7.78□□□□□ -1.16
NEDD8-206ENST00000531430 MARCH7Q9H992 704 aa7.78□□□□□ -1.16
NEDD8-206ENST00000531430 SIAEQ9HAT2 523 aa7.78□□□□□ -1.16
NEDD8-206ENST00000531430 LOC100509620A0A075B734 347 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 TRAV40A0A0B4J280 105 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 IGHV3-64DA0A0J9YX35 117 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 CLDN34H7C241 214 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 TIMM23O14925 209 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 TRMUO75648 421 aaKnown RBP7.77□□□□□ -1.17
NEDD8-206ENST00000531430 SLC2A10O95528 541 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 MMP7P09237 267 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-206ENST00000531430 ACADSP16219 412 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 TNFRSF1AP19438 455 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 GUCA1AP43080 201 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-206ENST00000531430 BTG1P62324 171 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 GNB2P62879 340 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 PSG4Q00888 419 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 PAX8Q06710 450 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 CD47Q08722 323 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 FADDQ13158 208 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 MPP2Q14168 576 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 ZMYND11Q15326 602 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 ZNF74Q16587 644 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 TTMPQ5BVD1 217 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 ZMAT1Q5H9K5 638 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 MTX3Q5HYI7 312 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 TMEM255AQ5JRV8 349 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 ENTPD8Q5MY95 495 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 OLFML2AQ68BL7 652 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 LRRN1Q6UXK5 716 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 OR10S1Q8NGN2 331 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 FAM110DQ8TAY7 271 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-206ENST00000531430 ITLN1Q8WWA0 313 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.77□□□□□ -1.173e-6■■■□□ 18.4
NEDD8-206ENST00000531430 POM121L2Q96KW2 1035 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 SLC30A2Q9BRI3 323 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 ELOVL3Q9HB03 270 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 ZIM2Q9NZV7 527 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 SLAMF8Q9P0V8 285 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-206ENST00000531430 HAO1Q9UJM8 370 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 PPP1R3CQ9UQK1 317 aa7.77□□□□□ -1.17
NEDD8-206ENST00000531430 A0A1B0GUS0 222 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 EVPLLA8MZ36 301 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 M0QX08 132 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 ALX3O95076 343 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 OPN1SWP03999 348 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 WNT2P09544 360 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 RPS2P15880 293 aaKnown RBP7.76□□□□□ -1.17
NEDD8-206ENST00000531430 FUT1P19526 365 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 LAP3P28838 519 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 PCBP3P57721 371 aaKnown RBP7.76□□□□□ -1.17
NEDD8-206ENST00000531430 STX1BP61266 288 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 PSG7Q13046 419 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 TMEM155Q4W5P6 130 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 ZNF362Q5T0B9 420 aaPredicted RBP7.76□□□□□ -1.17
NEDD8-206ENST00000531430 MBNL2Q5VZF2 373 aaKnown RBP7.76□□□□□ -1.17
NEDD8-206ENST00000531430 ZNF774Q6NX45 483 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 C1orf94Q6P1W5 598 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 ZNF613Q6PF04 617 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 ARL9Q6T311 187 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 MSANTD1Q6ZTZ1 278 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 RFPL4BQ6ZWI9 263 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 RBM45Q8IUH3 476 aaKnown RBP7.76□□□□□ -1.17
NEDD8-206ENST00000531430 C10orf111Q8N326 155 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 BHLHE22Q8NFJ8 381 aaPredicted RBP7.76□□□□□ -1.17
NEDD8-206ENST00000531430 ZNF420Q8TAQ5 688 aaPredicted RBP7.76□□□□□ -1.17
NEDD8-206ENST00000531430 SLC26A7Q8TE54 656 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 CMBLQ96DG6 245 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 C4orf45Q96LM5 186 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 OR52B2Q96RD2 323 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 SSBP3Q9BWW4 388 aaPredicted RBP7.76□□□□□ -1.17
NEDD8-206ENST00000531430 MMP27Q9H306 513 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 THAP1Q9NVV9 213 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 ARMCX1Q9P291 453 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 KLHL21Q9UJP4 597 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 ZNF229Q9UJW7 825 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 SLC7A7Q9UM01 511 aa7.76□□□□□ -1.17
NEDD8-206ENST00000531430 A0A1W2PPL8 197 aa7.75□□□□□ -1.17
NEDD8-206ENST00000531430 CLPSL1A2RUU4 121 aa7.75□□□□□ -1.17
NEDD8-206ENST00000531430 CEACAM18A8MTB9 384 aa7.75□□□□□ -1.17
NEDD8-206ENST00000531430 SURF4O15260 269 aa7.75□□□□□ -1.17
NEDD8-206ENST00000531430 CHP2O43745 196 aa7.75□□□□□ -1.17
NEDD8-206ENST00000531430 ABHD16AO95870 558 aa7.75□□□□□ -1.17
NEDD8-206ENST00000531430 CYB5R3P00387 301 aaPredicted RBP7.75□□□□□ -1.17
NEDD8-206ENST00000531430 CD55P08174 381 aa7.75□□□□□ -1.17
NEDD8-206ENST00000531430 BMP2P12643 396 aa7.75□□□□□ -1.17
NEDD8-206ENST00000531430 GSTM3P21266 225 aa7.75□□□□□ -1.17
NEDD8-206ENST00000531430 MDH2P40926 338 aaKnown RBP7.75□□□□□ -1.17
NEDD8-206ENST00000531430 AQP2P41181 271 aa7.75□□□□□ -1.17
NEDD8-206ENST00000531430 VSNL1P62760 191 aa7.75□□□□□ -1.17
NEDD8-206ENST00000531430 FMODQ06828 376 aa7.75□□□□□ -1.17
NEDD8-206ENST00000531430 RPL18Q07020 188 aaKnown RBP7.75□□□□□ -1.17
NEDD8-206ENST00000531430 CDK5R2Q13319 367 aa7.75□□□□□ -1.17
NEDD8-206ENST00000531430 TOP3AQ13472 1001 aaPredicted RBP7.75□□□□□ -1.17
NEDD8-206ENST00000531430 LAPTM4AQ15012 233 aa7.75□□□□□ -1.17
NEDD8-206ENST00000531430 DUSP7Q16829 419 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms