RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	NLRC3	Q7RTR2	1065 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	GATS	Q8NAP1	163 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	MDS2	Q8NDY4	140 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	DUSP19	Q8WTR2	217 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	TMEM239	Q8WW34	195 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	TMEM234	Q8WY98	164 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	SMPDL3B	Q92485	455 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	CNOT9	Q92600	299 aa	Known RBP	13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	ARSG	Q96EG1	525 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	ERMAP	Q96PL5	475 aa	Predicted RBP	13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	FAM173A	Q9BQD7	235 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	TMEM27	Q9HBJ8	222 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	ANKRD10	Q9NXR5	420 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	TUBD1	Q9UJT1	453 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	BOK	Q9UMX3	212 aa	Predicted RBP	13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	MAB21L2	Q9Y586	359 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	CEP295	Q9C0D2	2601 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	RIIAD1	A6NNX1	92 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540		J3QLW9	94 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	GATB	O75879	557 aa	Known RBP	13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	ARL6IP5	O75915	188 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	UCHL1	P09936	223 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	ZNF250	P15622	560 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	ZNF19	P17023	458 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	HTR2A	P28223	471 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	PTGDS	P41222	190 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	TNFSF10	P50591	281 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	CCR4	P51679	360 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	CCR6	P51684	374 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	ZNF117	Q03924	483 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	UBE2NL	Q5JXB2	153 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	PRAMEF20	Q5VT98	475 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	ZNF613	Q6PF04	617 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	WDR88	Q6ZMY6	472 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	MDGA2	Q7Z553	956 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	GPAT4	Q86UL3	456 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	SYS1	Q8N2H4	156 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	OR4K17	Q8NGC6	315 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	OR1J4	Q8NGS1	313 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	PHYHIP	Q92561	330 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	NTNG2	Q96CW9	530 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	MS4A3	Q96HJ5	214 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	C20orf85	Q9H1P6	137 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	KLHL1	Q9NR64	748 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	RPS6KB2	Q9UBS0	482 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	B4GALT7	Q9UBV7	327 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	ICAM5	Q9UMF0	924 aa		13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540	URB1	O60287	2271 aa	Known RBP	13.09	□□□□□ -0.31
NR1H3-231	ENST00000529540		A0A1B0GUH1	482 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	ANKUB1	A6NFN9	424 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	SSNA1	O43805	119 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	NME2P1	O60361	137 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	NUDT14	O95848	222 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	ECD	O95905	644 aa	Predicted RBP	13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	MT-ND4	P03905	459 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	SP1	P08047	785 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	SNRPB	P14678	240 aa	Known RBP	13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	NME2	P22392	152 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	CCR9	P51686	369 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	OR12D2	P58182	307 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	SNTB2	Q13425	540 aa	Known RBP	13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	TBR1	Q16650	682 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	WBP2NL	Q6ICG8	309 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	SPINK14	Q6IE38	97 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	ZNF227	Q86WZ6	799 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	OR5J2	Q8NH18	312 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	PFN4	Q8NHR9	129 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	GHSR	Q92847	366 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	CCDC120	Q96HB5	630 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	IFT27	Q9BW83	186 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	ENKD1	Q9H0I2	346 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	MED9	Q9NWA0	146 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	FBXL3	Q9UKT7	428 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	SIGLEC7	Q9Y286	467 aa		13.08	□□□□□ -0.31
NR1H3-231	ENST00000529540	DOCK10	Q96BY6	2186 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	ASPM	Q8IZT6	3477 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540		A0A087WZY1	265 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	PTP4A3	O75365	173 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	CBR3	O75828	277 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	ACVR1B	P36896	505 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	GDNF	P39905	211 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	ACAA2	P42765	397 aa	Known RBP	13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	ZNF41	P51814	821 aa	Predicted RBP	13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	CDK5R1	Q15078	307 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	OR1Q1	Q15612	314 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	ZNF766	Q5HY98	468 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	METTL11B	Q5VVY1	283 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	UNQ9370/PRO34162	Q6UXP9	181 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	THSD4	Q6ZMP0	1018 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	CDK20	Q8IZL9	346 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	SPIC	Q8N5J4	248 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	OR2T4	Q8NH00	348 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	ZNF563	Q8TA94	476 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	ST8SIA1	Q92185	356 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	SMIM19	Q96E16	107 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	ZFP3	Q96NJ6	502 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	SIGLEC12	Q96PQ1	595 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	GSX2	Q9BZM3	304 aa		13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.08	□□□□□ -0.32
NR1H3-231	ENST00000529540	PLA2G3	Q9NZ20	509 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms