RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 C1orf198Q9H425 327 aa14.62□□□□□ -0.07
CCS-203ENST00000526058 DYNLRB1Q9NP97 96 aa14.62□□□□□ -0.07
CCS-203ENST00000526058 IL1RAPQ9NPH3 570 aa14.62□□□□□ -0.07
CCS-203ENST00000526058 NRIP3Q9NQ35 241 aa14.62□□□□□ -0.07
CCS-203ENST00000526058 FBXO9Q9UK97 447 aaPredicted RBP14.62□□□□□ -0.07
CCS-203ENST00000526058 SVEP1Q4LDE5 3571 aa14.62□□□□□ -0.07
CCS-203ENST00000526058 TEX13CA0A0J9YWL9 993 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 PRSS37A4D1T9 235 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 VWC2LB2RUY7 222 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 XKRYO14609 159 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 IMPA2O14732 288 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 SNAP29O95721 258 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 PTHP01270 115 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 CST2P09228 141 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 CALB2P22676 271 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 RRM2P31350 389 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 APLNRP35414 380 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 ALDH3B1P43353 468 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 EVX1P49640 407 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 SMIM11AP58511 58 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 RPS23P62266 143 aaKnown RBP14.61□□□□□ -0.07
CCS-203ENST00000526058 PSG4Q00888 419 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 LOXL1Q08397 574 aaPredicted RBP14.61□□□□□ -0.07
CCS-203ENST00000526058 MAD2L1BPQ15013 274 aaPredicted RBP14.61□□□□□ -0.07
CCS-203ENST00000526058 ZDHHC21Q8IVQ6 265 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 OR1J2Q8NGS2 313 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 GPX7Q96SL4 187 aaPredicted RBP14.61□□□□□ -0.07
CCS-203ENST00000526058 NDEL1Q9GZM8 345 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 TPK1Q9H3S4 243 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 KRCC1Q9NPI7 259 aaPredicted RBP14.61□□□□□ -0.07
CCS-203ENST00000526058 ACTR3BQ9P1U1 418 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 DUSP13Q9UII6 198 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 IER3IP1Q9Y5U9 82 aa14.61□□□□□ -0.07
CCS-203ENST00000526058 SYNGR3O43761 229 aa14.6□□□□□ -0.07
CCS-203ENST00000526058 OR10H3O60404 316 aa14.6□□□□□ -0.07
CCS-203ENST00000526058 CLPTM1O96005 669 aa14.6□□□□□ -0.07
CCS-203ENST00000526058 TP53P04637 393 aaPredicted RBP14.6□□□□□ -0.07
CCS-203ENST00000526058 LCKP06239 509 aa14.6□□□□□ -0.07
CCS-203ENST00000526058 DAOP14920 347 aa14.6□□□□□ -0.07
CCS-203ENST00000526058 CTLA4P16410 223 aa14.6□□□□□ -0.07
CCS-203ENST00000526058 CCNOP22674 350 aa14.6□□□□□ -0.07
CCS-203ENST00000526058 STOMP27105 288 aa14.6□□□□□ -0.07
CCS-203ENST00000526058 SDHAP31040 664 aa14.6□□□□□ -0.07
CCS-203ENST00000526058 GUCA1AP43080 201 aaPredicted RBP14.6□□□□□ -0.07
CCS-203ENST00000526058 UCP2P55851 309 aa14.6□□□□□ -0.07
CCS-203ENST00000526058 PPP2R2BQ00005 443 aa14.6□□□□□ -0.07
CCS-203ENST00000526058 MS4A2Q01362 244 aa14.6□□□□□ -0.07
CCS-203ENST00000526058 KRR1Q13601 381 aaKnown RBP14.6□□□□□ -0.07
CCS-203ENST00000526058 ENDOGQ14249 297 aaKnown RBP14.6□□□□□ -0.07
CCS-203ENST00000526058 RGS7BPQ6MZT1 257 aaPredicted RBP14.6□□□□□ -0.07
CCS-203ENST00000526058 UGT2A3Q6UWM9 527 aa14.6□□□□□ -0.07
CCS-203ENST00000526058 NEU4Q8WWR8 484 aaPredicted RBP14.6□□□□□ -0.07
CCS-203ENST00000526058 ZNF416Q9BWM5 594 aa14.6□□□□□ -0.07
CCS-203ENST00000526058 OR2H1Q9GZK4 316 aa14.6□□□□□ -0.07
CCS-203ENST00000526058 WNT5BQ9H1J7 359 aa14.6□□□□□ -0.07
CCS-203ENST00000526058 LRMDAQ9H2I8 198 aa14.6□□□□□ -0.07
CCS-203ENST00000526058 EMC7Q9NPA0 242 aa14.6□□□□□ -0.07
CCS-203ENST00000526058 POLE4Q9NR33 117 aa14.6□□□□□ -0.07
CCS-203ENST00000526058 REV1Q9UBZ9 1251 aa14.6□□□□□ -0.07
CCS-203ENST00000526058 LOC100509620A0A075B734 347 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 LOC390937A0A1W2PQ73 354 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 TCRBV5S2A0A599 114 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 M0R233 179 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 NDUFS8O00217 210 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 SOCS2O14508 198 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 CD5LO43866 347 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 MSR1P21757 451 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 TMEM249Q2WGJ8 235 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 ALKBH6Q3KRA9 238 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 KRTAP21-3Q3LHN1 58 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 OTPQ5XKR4 325 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 GPR139Q6DWJ6 353 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 ZNF774Q6NX45 483 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 SMARCD3Q6STE5 483 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 DPY19L2P2Q6ZN68 376 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 PTCHD4Q6ZW05 846 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 ICA1LQ8NDH6 482 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 POM121L2Q96KW2 1035 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 PIMREGQ9BSJ6 248 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 SYT4Q9H2B2 425 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 RERGLQ9H628 205 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 MYOZ1Q9NP98 299 aaPredicted RBP14.59□□□□□ -0.07
CCS-203ENST00000526058 TIMM10BQ9Y5J6 103 aa14.59□□□□□ -0.07
CCS-203ENST00000526058 MALRD1Q5VYJ5 2156 aa14.58□□□□□ -0.07
CCS-203ENST00000526058 C5orf49A4QMS7 147 aa14.58□□□□□ -0.08
CCS-203ENST00000526058 LYNX1G3V0Z9 82 aa14.58□□□□□ -0.08
CCS-203ENST00000526058 AHCYL1O43865 530 aa14.58□□□□□ -0.08
CCS-203ENST00000526058 STAMBPO95630 424 aa14.58□□□□□ -0.08
CCS-203ENST00000526058 PPP1R3DO95685 299 aa14.58□□□□□ -0.08
CCS-203ENST00000526058 TXNDC12O95881 172 aa14.58□□□□□ -0.08
CCS-203ENST00000526058 ERCC1P07992 297 aaPredicted RBP14.58□□□□□ -0.08
CCS-203ENST00000526058 LYNX1P0DP58 116 aa14.58□□□□□ -0.08
CCS-203ENST00000526058 NAT2P11245 290 aa14.58□□□□□ -0.08
CCS-203ENST00000526058 USF1P22415 310 aaPredicted RBP14.58□□□□□ -0.08
CCS-203ENST00000526058 FPR3P25089 353 aa14.58□□□□□ -0.08
CCS-203ENST00000526058 WNT5AP41221 380 aa14.58□□□□□ -0.08
CCS-203ENST00000526058 CDKN2AP42771 156 aaKnown RBP14.58□□□□□ -0.08
CCS-203ENST00000526058 RAD52P43351 418 aa14.58□□□□□ -0.08
CCS-203ENST00000526058 NR4A2P43354 598 aa14.58□□□□□ -0.08
CCS-203ENST00000526058 RPS6KA3P51812 740 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms