RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 ALG12Q9BV10 488 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 RBM4Q9BWF3 364 aaKnown RBP4□□□□□ -1.77
CHMP4A-202ENST00000524955 ZNF416Q9BWM5 594 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 GABARAPL1Q9H0R8 117 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 WNT5BQ9H1J7 359 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 TOR3AQ9H497 397 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 CCNB1IP1Q9NPC3 277 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 HINT3Q9NQE9 182 aaKnown RBP4□□□□□ -1.77
CHMP4A-202ENST00000524955 POLE4Q9NR33 117 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 CMC2Q9NRP2 79 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 RASSF1Q9NS23 344 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 MRPL22Q9NWU5 206 aaKnown RBP4□□□□□ -1.77
CHMP4A-202ENST00000524955 B3GNT2Q9NY97 397 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 VSX1Q9NZR4 365 aaPredicted RBP4□□□□□ -1.77
CHMP4A-202ENST00000524955 ASH2LQ9UBL3 628 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 KCNN3Q9UGI6 736 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 POU2F3Q9UKI9 436 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 ITGB1BP2Q9UKP3 347 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 B9D1Q9UPM9 204 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 PLEKHA6Q9Y2H5 1048 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 POLR1DQ9Y2S0 133 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 AMDHD2Q9Y303 409 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 N6AMT1Q9Y5N5 214 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 ARHGAP21Q5T5U3 1957 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 MED12LQ86YW9 2145 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 DOCK7Q96N67 2140 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 POLEQ07864 2286 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 FLNCQ14315 2725 aa4□□□□□ -1.77
CHMP4A-202ENST00000524955 MYO18BQ8IUG5 2567 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 LOC100509620A0A075B734 347 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 ARPC4-TTLL3A0A0A6YYG9 625 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 IGHV2OR16-5A0A0B4J2B6 119 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 ZAR1LA6NP61 321 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 SHISA9B4DS77 424 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 E7EQL1 145 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 PRR23D1E9PI22 279 aaPredicted RBP3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 DLGAP1O14490 977 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 MAGEB4O15481 346 aaPredicted RBP3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 TLX2O43763 284 aaPredicted RBP3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 IDH3BO43837 385 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 GPRIN2O60269 458 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 SELENOFO60613 162 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 UBL3O95164 117 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 FARS2O95363 451 aaKnown RBP3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 RAB36O95755 333 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 IFNGP01579 166 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 ALPLP05186 524 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 CD3EP07766 207 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 DBHP09172 617 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 MMP7P09237 267 aaPredicted RBP3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 SPARCP09486 303 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 PRR23D2P0DMB1 279 aaPredicted RBP3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 GAAP10253 952 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 APEHP13798 732 aaKnown RBP3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 CBR1P16152 277 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 PPP3CBP16298 524 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 ZNF14P17017 642 aaPredicted RBP3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 ZNF3P17036 446 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 HOXB6P17509 224 aaKnown RBP3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 MSR1P21757 451 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 CRABP1P29762 137 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 GUCA1AP43080 201 aaPredicted RBP3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 ALDH3A2P51648 485 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 ZNF133P52736 654 aaPredicted RBP3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 CDH11P55287 796 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 SH3BGRP55822 239 aaPredicted RBP3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 ESRRGP62508 458 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 ADAM8P78325 824 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 PSG4Q00888 419 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 NAAAQ02083 359 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 TEKQ02763 1124 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 HSF2Q03933 536 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 HGFACQ04756 655 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 GLO1Q04760 184 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 HNRNPA0Q13151 305 aaKnown RBP3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 MSMPQ1L6U9 139 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 ALKBH6Q3KRA9 238 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 CCDC92Q53HC0 331 aaPredicted RBP3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 SLX4IPQ5VYV7 408 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 C12orf73Q69YU5 71 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 RPL13AP3Q6NVV1 102 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 TMEM108Q6UXF1 575 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 CFAP77Q6ZQR2 320 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 NAA40Q86UY6 237 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 LRP11Q86VZ4 500 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 ERI1Q8IV48 349 aaKnown RBP3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 C17orf78Q8N4C9 275 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 RFLNBQ8N5W9 214 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 C1orf162Q8NEQ5 155 aaPredicted RBP3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 SLC26A10Q8NG04 563 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 OR10H5Q8NGA6 315 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 OR6N2Q8NGY6 317 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 OR2T4Q8NH00 348 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 FAM81AQ8TBF8 368 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 NRG4Q8WWG1 115 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 CYGBQ8WWM9 190 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 C14orf79Q96F83 325 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 LURAP1Q96LR2 239 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 ZNF75AQ96N20 296 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 AMELYQ99218 206 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms