RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 ZER1Q7Z7L7 766 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 HIPK4Q8NE63 616 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 WFDC9Q8NEX5 89 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 ABHD4Q8TB40 342 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 LHX4Q969G2 390 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 OR2V2Q96R30 315 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 SIRPDQ9H106 197 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 PPA2Q9H2U2 334 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 C12orf10Q9HB07 376 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 ZNRD1Q9P1U0 126 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 DCDC2Q9UHG0 476 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 ZNF443Q9Y2A4 671 aaPredicted RBP11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 LYSTQ99698 3801 aa11.43□□□□□ -0.58
NKX3-1-202ENST00000523261 LCE6AA0A183 80 aa11.43□□□□□ -0.58
NKX3-1-202ENST00000523261 ANKRD61A6NGH8 418 aa11.43□□□□□ -0.58
NKX3-1-202ENST00000523261 IFNL4K9M1U5 179 aa11.43□□□□□ -0.58
NKX3-1-202ENST00000523261 SURF4O15260 269 aa11.43□□□□□ -0.58
NKX3-1-202ENST00000523261 FSTL3O95633 263 aa11.43□□□□□ -0.58
NKX3-1-202ENST00000523261 CYB5R3P00387 301 aaPredicted RBP11.43□□□□□ -0.58
NKX3-1-202ENST00000523261 BGLAPP02818 100 aa11.43□□□□□ -0.58
NKX3-1-202ENST00000523261 CASC10Q5T4H9 136 aa11.43□□□□□ -0.58
NKX3-1-202ENST00000523261 LYPD2Q6UXB3 125 aa11.43□□□□□ -0.58
NKX3-1-202ENST00000523261 OR4F17Q8NGA8 305 aa11.43□□□□□ -0.58
NKX3-1-202ENST00000523261 OR6S1Q8NH40 331 aa11.43□□□□□ -0.58
NKX3-1-202ENST00000523261 OR6X1Q8NH79 312 aa11.43□□□□□ -0.58
NKX3-1-202ENST00000523261 OR4F4Q96R69 305 aa11.43□□□□□ -0.58
NKX3-1-202ENST00000523261 MRPL39Q9NYK5 338 aaKnown RBP11.43□□□□□ -0.58
NKX3-1-202ENST00000523261 FAM96BQ9Y3D0 163 aa11.43□□□□□ -0.58
NKX3-1-202ENST00000523261 A0A087WUV0 522 aaPredicted RBP11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 ADARB2-AS1A8MUL3 147 aa11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 PLPP3O14495 311 aa11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 PLIN3O60664 434 aa11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 ICMTO60725 284 aa11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 GLRA3O75311 464 aa11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 LIPFP07098 398 aa11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 MSX2P35548 267 aaPredicted RBP11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 KIR2DS4P43632 304 aa11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 GDI2P50395 445 aaKnown RBP11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 GNG11P61952 73 aa11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 SLC7A5Q01650 507 aa11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 CASP8Q14790 479 aa11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 KLHL22Q53GT1 634 aa11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 RUNDC3AQ59EK9 446 aa11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 PDZD9Q8IXQ8 264 aa11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 LRRC34Q8IZ02 419 aa11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 LRRC18Q8N456 261 aa11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 PPP1R35Q8TAP8 253 aa11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 ZNF420Q8TAQ5 688 aaPredicted RBP11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 MOGAT1Q96PD6 335 aa11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 SPATA9Q9BWV2 254 aa11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 ASPNQ9BXN1 380 aa11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 SEMA6AQ9H2E6 1030 aa11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 MAN2C1Q9NTJ4 1040 aa11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 NOP53Q9NZM5 478 aaKnown RBP11.42□□□□□ -0.58
NKX3-1-202ENST00000523261 CHRNGP07510 517 aa11.41□□□□□ -0.58
NKX3-1-202ENST00000523261 QDPRP09417 244 aa11.41□□□□□ -0.58
NKX3-1-202ENST00000523261 FBP1P09467 338 aa11.41□□□□□ -0.58
NKX3-1-202ENST00000523261 CPA3P15088 417 aa11.41□□□□□ -0.58
NKX3-1-202ENST00000523261 CD33P20138 364 aa11.41□□□□□ -0.58
NKX3-1-202ENST00000523261 ANXA11P50995 505 aaKnown RBP11.41□□□□□ -0.58
NKX3-1-202ENST00000523261 TXNL4AP83876 142 aaKnown RBP11.41□□□□□ -0.58
NKX3-1-202ENST00000523261 FAM201AQ5SY85 155 aa11.41□□□□□ -0.58
NKX3-1-202ENST00000523261 ZBTB37Q5TC79 503 aa11.41□□□□□ -0.58
NKX3-1-202ENST00000523261 ANXA8L1Q5VT79 327 aa11.41□□□□□ -0.58
NKX3-1-202ENST00000523261 METTL11BQ5VVY1 283 aa11.41□□□□□ -0.58
NKX3-1-202ENST00000523261 HOMEZQ8IX15 550 aa11.41□□□□□ -0.58
NKX3-1-202ENST00000523261 SPERTQ8NA61 448 aa11.41□□□□□ -0.58
NKX3-1-202ENST00000523261 MZB1Q8WU39 189 aa11.41□□□□□ -0.58
NKX3-1-202ENST00000523261 ZNF566Q969W8 418 aa11.41□□□□□ -0.58
NKX3-1-202ENST00000523261 MAGEB18Q96M61 343 aa11.41□□□□□ -0.58
NKX3-1-202ENST00000523261 DNAH7Q8WXX0 4024 aa11.4□□□□□ -0.58
NKX3-1-202ENST00000523261 A0A1B0GWA3 101 aa11.4□□□□□ -0.58
NKX3-1-202ENST00000523261 LRRN3E7EW58 273 aa11.4□□□□□ -0.58
NKX3-1-202ENST00000523261 F13BP05160 661 aa11.4□□□□□ -0.58
NKX3-1-202ENST00000523261 NHLRC4P0CG21 123 aaPredicted RBP11.4□□□□□ -0.58
NKX3-1-202ENST00000523261 PGA4P0DJD7 388 aa11.4□□□□□ -0.58
NKX3-1-202ENST00000523261 PGA3P0DJD8 388 aa11.4□□□□□ -0.58
NKX3-1-202ENST00000523261 ZNF32P17041 273 aa11.4□□□□□ -0.58
NKX3-1-202ENST00000523261 ETV4P43268 484 aa11.4□□□□□ -0.58
NKX3-1-202ENST00000523261 CCDC153Q494R4 210 aa11.4□□□□□ -0.58
NKX3-1-202ENST00000523261 DCDC5Q6ZRR9 648 aa11.4□□□□□ -0.58
NKX3-1-202ENST00000523261 SLC35D2Q76EJ3 337 aa11.4□□□□□ -0.58
NKX3-1-202ENST00000523261 NDUFA11Q86Y39 141 aa11.4□□□□□ -0.58
NKX3-1-202ENST00000523261 C10orf107Q8IVU9 208 aa11.4□□□□□ -0.58
NKX3-1-202ENST00000523261 AKR7LQ8NHP1 331 aa11.4□□□□□ -0.58
NKX3-1-202ENST00000523261 SLC25A44Q96H78 314 aaPredicted RBP11.4□□□□□ -0.58
NKX3-1-202ENST00000523261 ZNF607Q96SK3 696 aa11.4□□□□□ -0.58
NKX3-1-202ENST00000523261 CENPHQ9H3R5 247 aa11.4□□□□□ -0.58
NKX3-1-202ENST00000523261 RPS6KB2Q9UBS0 482 aa11.4□□□□□ -0.58
NKX3-1-202ENST00000523261 C11orf98E9PRG8 122 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 FBXO24O75426 580 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 ADORA3P0DMS8 318 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 VSIG10L2P0DP72 767 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 CD28P10747 220 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 KITLGP21583 273 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 PSMB10P40306 273 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 CRATP43155 626 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 CD276Q5ZPR3 534 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 CALHM3Q86XJ0 350 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 LSMEM1Q8N8F7 131 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms