RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 SF3B5Q9BWJ5 86 aaKnown RBP5.28□□□□□ -1.56
VPS13B-211ENST00000522802 LINC00470Q9BZP3 86 aa5.28□□□□□ -1.56
VPS13B-211ENST00000522802 ZNF350Q9GZX5 532 aa5.28□□□□□ -1.56
VPS13B-211ENST00000522802 OR51B6Q9H340 312 aa5.28□□□□□ -1.56
VPS13B-211ENST00000522802 REEP4Q9H6H4 257 aa5.28□□□□□ -1.56
VPS13B-211ENST00000522802 HINT3Q9NQE9 182 aaKnown RBP5.28□□□□□ -1.56
VPS13B-211ENST00000522802 ADPRHL2Q9NX46 363 aa5.28□□□□□ -1.56
VPS13B-211ENST00000522802 B3GNT2Q9NY97 397 aa5.28□□□□□ -1.56
VPS13B-211ENST00000522802 ZNF224Q9NZL3 707 aa5.28□□□□□ -1.56
VPS13B-211ENST00000522802 TAAR3PQ9P1P4 343 aa5.28□□□□□ -1.56
VPS13B-211ENST00000522802 BAIAP2L1Q9UHR4 511 aa5.28□□□□□ -1.56
VPS13B-211ENST00000522802 ZNF346Q9UL40 294 aaKnown RBP5.28□□□□□ -1.56
VPS13B-211ENST00000522802 PCDHGB4Q9UN71 923 aa5.28□□□□□ -1.56
VPS13B-211ENST00000522802 FAF1Q9UNN5 650 aaPredicted RBP5.28□□□□□ -1.56
VPS13B-211ENST00000522802 PPP2R2CQ9Y2T4 447 aa5.28□□□□□ -1.56
VPS13B-211ENST00000522802 CCL27Q9Y4X3 112 aa5.28□□□□□ -1.56
VPS13B-211ENST00000522802 INSIG2Q9Y5U4 225 aa5.28□□□□□ -1.56
VPS13B-211ENST00000522802 STAB2Q8WWQ8 2551 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 DSPPQ9NZW4 1301 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 C5orf63A6NC05 138 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 AQP12BA6NM10 295 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 LINC01548A6NM66 108 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 RPL36A-HNRNPH2H7BZ11 118 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 J3KTA2 159 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 ZNF208O43345 1280 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 TPD52L2O43399 206 aaKnown RBP5.27□□□□□ -1.57
VPS13B-211ENST00000522802 PIP5K1CO60331 668 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 SHOX2O60902 331 aaPredicted RBP5.27□□□□□ -1.57
VPS13B-211ENST00000522802 C6orf47O95873 294 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 OPN1MWP04001 364 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 GPIP06744 558 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 CHRM4P08173 479 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 OPN1MW2P0DN77 364 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 OPN1MW3P0DN78 364 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 CD79AP11912 226 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 B4GALT1P15291 398 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 CD80P33681 288 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 MAGEA4P43358 317 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 POLR2HP52434 150 aaKnown RBP5.27□□□□□ -1.57
VPS13B-211ENST00000522802 PKNOX1P55347 436 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 CLDN17P56750 224 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 KLF3P57682 345 aaPredicted RBP5.27□□□□□ -1.57
VPS13B-211ENST00000522802 RPS23P62266 143 aaKnown RBP5.27□□□□□ -1.57
VPS13B-211ENST00000522802 GALK2Q01415 458 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 FUT5Q11128 374 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 CALCOCO2Q13137 446 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 TSTQ16762 297 aaKnown RBP5.27□□□□□ -1.57
VPS13B-211ENST00000522802 HFEQ30201 348 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 TRMT5Q32P41 509 aaKnown RBP5.27□□□□□ -1.57
VPS13B-211ENST00000522802 PCGF3Q3KNV8 242 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 SPRNQ5BIV9 151 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 TEX35Q5T0J7 233 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 CCDC144NLQ6NUI1 221 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 TMEM154Q6P9G4 183 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 ZNF584Q8IVC4 421 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 CLEC4FQ8N1N0 589 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 KDM8Q8N371 416 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 PAQR4Q8N4S7 273 aaPredicted RBP5.27□□□□□ -1.57
VPS13B-211ENST00000522802 VPS37AQ8NEZ2 397 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 OR7A2PQ8NGA2 310 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 OR52E2Q8NGJ4 325 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 ST7LQ8TDW4 575 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 CNOT9Q92600 299 aaKnown RBP5.27□□□□□ -1.57
VPS13B-211ENST00000522802 RAB1CQ92928 201 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 TIMD4Q96H15 378 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 FCRL1Q96LA6 429 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 PRPF18Q99633 342 aaKnown RBP5.27□□□□□ -1.57
VPS13B-211ENST00000522802 IQCGQ9H095 443 aaKnown RBP5.27□□□□□ -1.57
VPS13B-211ENST00000522802 MID1IP1Q9NPA3 183 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 RCE1Q9Y256 329 aa5.27□□□□□ -1.57
VPS13B-211ENST00000522802 IGLV3-9A0A075B6K5 115 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 A8MXK9 166 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 ZNF99A8MXY4 864 aaPredicted RBP5.26□□□□□ -1.57
VPS13B-211ENST00000522802 CLIC1O00299 241 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 GPR137BO60478 399 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 SCN2BO60939 215 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 SEC22BO75396 215 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 STX11O75558 287 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 IGHV2-70P01814 119 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 MELTFP08582 738 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 OR8G3PP0DMU2 310 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 LAMP1P11279 417 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 SOAT1P35610 550 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 CCT3P49368 545 aaKnown RBP5.26□□□□□ -1.57
VPS13B-211ENST00000522802 RPL38P63173 70 aaKnown RBP5.26□□□□□ -1.57
VPS13B-211ENST00000522802 BNIP2Q12982 314 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 LARS2Q15031 903 aaKnown RBP5.26□□□□□ -1.57
VPS13B-211ENST00000522802 MMEL1Q495T6 779 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 PRAMEF8Q5VWM4 474 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 PRAMEF7Q5VXH5 474 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 LIPMQ5VYY2 423 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 CLEC6AQ6EIG7 209 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 TMEM225Q6GV28 225 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 TYW3Q6IPR3 259 aaKnown RBP5.26□□□□□ -1.57
VPS13B-211ENST00000522802 ZNF782Q6ZMW2 699 aaPredicted RBP5.26□□□□□ -1.57
VPS13B-211ENST00000522802 DCDC5Q6ZRR9 648 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 LRRC8AQ8IWT6 810 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 TMEM123Q8N131 208 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 ARFGAP2Q8N6H7 521 aa5.26□□□□□ -1.57
VPS13B-211ENST00000522802 PNLDC1Q8NA58 520 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms