RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 MAGEB1P43366 347 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 TAS2R46P59540 309 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 DEFA6Q01524 100 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 DHRS2Q13268 280 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF345Q14585 488 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 USF2Q15853 346 aaPredicted RBP6.07□□□□□ -1.44
CPNE3-203ENST00000517490 C14orf28Q4W4Y0 310 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 C1orf189Q5VU69 101 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF660Q6AZW8 331 aaPredicted RBP6.07□□□□□ -1.44
CPNE3-203ENST00000517490 PET117Q6UWS5 81 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 FJX1Q86VR8 437 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 SLC22A24Q8N4F4 322 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 NXPE3Q969Y0 559 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 DNAJA3Q96EY1 480 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 CNTNAP3Q9BZ76 1288 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 IGFLR1Q9H665 355 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 HEXA-AS1Q9H8Q6 139 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 CGGBP1Q9UFW8 167 aaPredicted RBP6.07□□□□□ -1.44
CPNE3-203ENST00000517490 SERTAD3Q9UJW9 196 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 PCDHGA5Q9Y5G8 931 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 FITM1A5D6W6 292 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 GREM1O60565 184 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 WNT11O96014 354 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 CPT2P23786 658 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 CASRP41180 1078 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 EMDP50402 254 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 DAP3P51398 398 aaKnown RBP6.06□□□□□ -1.44
CPNE3-203ENST00000517490 SNRPNP63162 240 aaKnown RBP6.06□□□□□ -1.44
CPNE3-203ENST00000517490 DHODHQ02127 395 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 RUNX3Q13761 415 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 EBPQ15125 230 aaKnown RBP6.06□□□□□ -1.44
CPNE3-203ENST00000517490 KIRREL2Q6UWL6 708 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 TFAP2EQ6VUC0 442 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF595Q8IYB9 648 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF283Q8N7M2 679 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 ZDHHC22Q8N966 263 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 OR1S2Q8NGQ3 325 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 LCORQ96JN0 433 aaPredicted RBP6.06□□□□□ -1.44
CPNE3-203ENST00000517490 VN1R3Q9BXE9 311 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 TAF9BQ9HBM6 251 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 MBNL1Q9NR56 388 aaKnown RBP6.06□□□□□ -1.44
CPNE3-203ENST00000517490 TRAV36DV7A0A075B6V5 113 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 OIP5O43482 229 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 CRTAPO75718 401 aaPredicted RBP6.06□□□□□ -1.44
CPNE3-203ENST00000517490 CHRM2P08172 466 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 HOXB5P09067 269 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 HOXB2P14652 356 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 TBXA2RP21731 343 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 PTAFRP25105 342 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 GDI1P31150 447 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 RFC3P40938 356 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 GAS1P54826 345 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 CLRN1P58418 232 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 HERV-K104P61576 105 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 MAT1AQ00266 395 aaKnown RBP6.06□□□□□ -1.44
CPNE3-203ENST00000517490 PJVKQ0ZLH3 352 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 SQSTM1Q13501 440 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 TDGQ13569 410 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 RUNX2Q13950 521 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 EIF2S3LQ2VIR3 472 aaKnown RBP6.06□□□□□ -1.44
CPNE3-203ENST00000517490 RTL6Q6ICC9 239 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 KDM8Q8N371 416 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 SUMF2Q8NBJ7 301 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 BCL2L14Q9BZR8 327 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 SELENOIQ9C0D9 397 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 TMEM231Q9H6L2 316 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 TAS2R4Q9NYW5 299 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 PCYT1BQ9Y5K3 369 aaPredicted RBP6.06□□□□□ -1.44
CPNE3-203ENST00000517490 AUP1Q9Y679 476 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 MYLKQ15746 1914 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 A0A087WUJ7 227 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 A0A0A6YYC8 382 aaPredicted RBP6.06□□□□□ -1.44
CPNE3-203ENST00000517490 A0A0G2JK05 382 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 TMEM235A6NFC5 223 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 RHPN2P1A8MT19 583 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 B4DGG1 531 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 I3L1I5 382 aaPredicted RBP6.06□□□□□ -1.44
CPNE3-203ENST00000517490 GPR31O00270 319 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 LILRB3O75022 631 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 LILRB5O75023 590 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 HPP00738 406 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 CSF2RBP32927 897 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 SLC6A9P48067 706 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 TM4SF4P48230 202 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 DEFB103AP81534 67 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 EFNB1P98172 346 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 GGTLC2Q14390 218 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 SLC17A1Q14916 467 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 TMEM215Q68D42 235 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 LRRC69Q6ZNQ3 347 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 NAA40Q86UY6 237 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 NAXEQ8NCW5 288 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 OR1S1Q8NH92 325 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 HOXB13Q92826 284 aaPredicted RBP6.06□□□□□ -1.44
CPNE3-203ENST00000517490 C3orf49Q96BT1 292 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 RSPRY1Q96DX4 576 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 TEX101Q9BY14 249 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 TINAGL1Q9GZM7 467 aaPredicted RBP6.06□□□□□ -1.44
CPNE3-203ENST00000517490 C1orf123Q9NWV4 160 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 RPH3AQ9Y2J0 694 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms