RNA–Protein interactions for RNA: ENST00000508604.5

NUP54-208, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-208ENST00000508604 TUBAL3A6NHL2 446 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 WASHC1A8K0Z3 465 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 GABRR3A8MPY1 467 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 PDZK1P1A8MUH7 402 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 LEUTXA8MZ59 168 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 WASH3PC4AMC7 463 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 KRBOX1C9JBD0 128 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 TMEM238C9JI98 176 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 F8VP50 259 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 H7C2Y5 167 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 I3L4J1 428 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 KCNK1O00180 336 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 WWP2O00308 870 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 SULT1C2O00338 296 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 KPNA3O00505 521 aaPredicted RBP1.44□□□□□ -2.18
NUP54-208ENST00000508604 PRRG1O14668 218 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 ADAM12O43184 909 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 PLIN3O60664 434 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 WBP4O75554 376 aaKnown RBP1.44□□□□□ -2.18
NUP54-208ENST00000508604 MED6O75586 246 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 GATBO75879 557 aaKnown RBP1.44□□□□□ -2.18
NUP54-208ENST00000508604 SNAI1O95863 264 aaPredicted RBP1.44□□□□□ -2.18
NUP54-208ENST00000508604 AK1P00568 194 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 PPBPP02775 128 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 UQCRFS1P1P0C7P4 283 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 SLC35E2BP0CK96 405 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 OR8G3PP0DMU2 310 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 CT45A10P0DMU9 189 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 CALCBP10092 127 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 SLC2A1P11166 492 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 ETS1P14921 441 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 UQCRBP14927 111 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 OGNP20774 298 aaKnown RBP1.44□□□□□ -2.18
NUP54-208ENST00000508604 IDSP22304 550 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 IGFBP5P24593 272 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 PAX6P26367 422 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 DCKP27707 260 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 ERP29P30040 261 aaKnown RBP1.44□□□□□ -2.18
NUP54-208ENST00000508604 OTX2P32243 289 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 CCR7P32248 378 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 MPIP34949 423 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 UGT1A5P35504 534 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 TGFBR2P37173 567 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 RBMXP38159 391 aaKnown RBP1.44□□□□□ -2.18
NUP54-208ENST00000508604 NAA10P41227 235 aaPredicted RBP1.44□□□□□ -2.18
NUP54-208ENST00000508604 BTDP43251 543 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 CAPZBP47756 277 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 PSMD8P48556 350 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 EMP2P54851 167 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 KIAA1024LP59773 190 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 CXCR4P61073 352 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 PSME3P61289 254 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 MAGOHP61326 146 aaKnown RBP1.44□□□□□ -2.18
NUP54-208ENST00000508604 COPZ1P61923 177 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 ESRRGP62508 458 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 KIR2DS1Q14954 304 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 TMED2Q15363 201 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 SLC36A3Q495N2 470 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 CDNFQ49AH0 187 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 MPPE1Q53F39 396 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 HSD17B12Q53GQ0 312 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 AKIRIN2Q53H80 203 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 ACTBL2Q562R1 376 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 MS4A13Q5J8X5 152 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 SPANXN2Q5MJ10 180 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 NKAIN2Q5VXU1 208 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 FRMPD2BQ6IN97 320 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 CAPN13Q6MZZ7 669 aaPredicted RBP1.44□□□□□ -2.18
NUP54-208ENST00000508604 CCDC137Q6PK04 289 aaKnown RBP1.44□□□□□ -2.18
NUP54-208ENST00000508604 MFSD7Q6UXD7 560 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 WASH2PQ6VEQ5 465 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 MOB2Q70IA6 237 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 NDUFAF7Q7L592 441 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 GDPD3Q7L5L3 318 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 SLC16A14Q7RTX9 510 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 LRRC70Q7Z2Q7 622 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 ABHD12BQ7Z5M8 362 aaPredicted RBP1.44□□□□□ -2.18
NUP54-208ENST00000508604 LHFPL4Q7Z7J7 247 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 CYP4Z1Q86W10 505 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 C17orf64Q86WR6 236 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 DHFR2Q86XF0 187 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 PHF13Q86YI8 300 aaPredicted RBP1.44□□□□□ -2.18
NUP54-208ENST00000508604 TMEM126BQ8IUX1 230 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 KDM8Q8N371 416 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 STX19Q8N4C7 294 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 EIF4E3Q8N5X7 224 aaKnown RBP1.44□□□□□ -2.18
NUP54-208ENST00000508604 CCDC54Q8NEL0 328 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 OR1M1Q8NGA1 313 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 OR52H1Q8NGJ2 320 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 OR5D18Q8NGL1 313 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 BLOC1S5Q8TDH9 187 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 GGHQ92820 318 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 PSMG2Q969U7 264 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 MRGPRFQ96AM1 343 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 EXOSC8Q96B26 276 aaKnown RBP1.44□□□□□ -2.18
NUP54-208ENST00000508604 DCPSQ96C86 337 aaKnown RBP1.44□□□□□ -2.18
NUP54-208ENST00000508604 MRPL38Q96DV4 380 aaKnown RBP1.44□□□□□ -2.18
NUP54-208ENST00000508604 MRPL53Q96EL3 112 aaKnown RBP1.44□□□□□ -2.18
NUP54-208ENST00000508604 PCED1BQ96HM7 432 aa1.44□□□□□ -2.18
NUP54-208ENST00000508604 SLC35E1Q96K37 410 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms