RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 SLC35A3Q9Y2D2 325 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 UBIAD1Q9Y5Z9 338 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 DSPPQ9NZW4 1301 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 MYO7AQ13402 2215 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 DENND4AQ7Z401 1863 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 WDR87Q6ZQQ6 2873 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 DMXL1Q9Y485 3027 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 GVINP1Q7Z2Y8 2422 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 TRBV5-7A0A0A0MS05 114 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 A0A1B0GUV1 79 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 RNF222A6NCQ9 220 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 LRIT2A6NDA9 550 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 NCF1BA6NI72 391 aaPredicted RBP4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 MAGEB17A8MXT2 336 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 ZNF587BE7ETH6 402 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 H0YIV9 168 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 GFYI3L273 518 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 HAS3O00219 553 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 RTCAO00442 366 aaKnown RBP4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 ZNF197O14709 1029 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 LINC01565O15544 149 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 MBTPS2O43462 519 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 HCRTR2O43614 444 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 TSPAN2O60636 221 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 STK16O75716 305 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 NDUFB6O95139 128 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 SIX6O95475 246 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 PPP1R3DO95685 299 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 PMS2P2O95744 297 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 AIFM1O95831 613 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 GCGP01275 180 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 CD8AP01732 235 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 VTNP04004 478 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 IFNW1P05000 195 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 ASGR1P07306 291 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 RAB40ALP0C0E4 278 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 OR5AC1P0C628 307 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 STAG3L1P0CL83 205 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 ZNF44P15621 663 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 CD1CP29017 333 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 HOXA13P31271 388 aaPredicted RBP4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 BMI1P35226 326 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 FEN1P39748 380 aaKnown RBP4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 CD86P42081 329 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 RABIFP47224 123 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 RPL34P49207 117 aaKnown RBP4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 PPT1P50897 306 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 CCR6P51684 374 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 SMSP52788 366 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 OR10A3P58181 314 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 RPS14P62263 151 aaKnown RBP4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 PPIAP62937 165 aaKnown RBP4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 RPL38P63173 70 aaKnown RBP4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 VLDLRP98155 873 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 CYCSP99999 105 aaKnown RBP4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 TNFRSF9Q07011 255 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 ARHGAP1Q07960 439 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 ELAVL2Q12926 359 aaKnown RBP4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 GANABQ14697 944 aaKnown RBP4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 IRF4Q15306 451 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 RSU1Q15404 277 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 GOLGA7BQ2TAP0 167 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 SLC36A2Q495M3 483 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 UBE2NLQ5JXB2 153 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 FAM182AQ5T1J6 154 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 GCNT6Q5T4J0 391 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 C9orf64Q5T6V5 341 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 ARMC12Q5T9G4 340 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 C9orf57Q5W0N0 161 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 C12orf73Q69YU5 71 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 OR10K2Q6IF99 312 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 TRIM40Q6P9F5 258 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 ZNF613Q6PF04 617 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 TSSK4Q6SA08 328 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 ENPP7Q6UWV6 458 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 SPNS3Q6ZMD2 512 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 SLC35D2Q76EJ3 337 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 LDB1Q86U70 411 aaPredicted RBP4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 ZNF546Q86UE3 836 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 RANBP3LQ86VV4 465 aaPredicted RBP4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 TMPRSS12Q86WS5 348 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 MARCH9Q86YJ5 346 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 TGIF2LXQ8IUE1 241 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 CBLN2Q8IUK8 224 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 SIAH3Q8IW03 269 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 GPR65Q8IYL9 337 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 FAM185AQ8N0U4 392 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 ARL14Q8N4G2 192 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 ARRDC1Q8N5I2 433 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 SLC5A8Q8N695 610 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 TMEM217Q8N7C4 229 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 ZNF383Q8NA42 475 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 ACBD4Q8NC06 268 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 KLHDC9Q8NEP7 349 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 ACVR1CQ8NER5 493 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 SDR9C7Q8NEX9 313 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 OR7G2Q8NG99 324 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 OR5B17Q8NGF7 314 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 OR4C15Q8NGM1 316 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 PIGXQ8TBF5 258 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms