RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 OR4K13Q8NH42 304 aa15.41■□□□□ 0.06
SMN1-204ENST00000506163 NIPSNAP1Q9BPW8 284 aa15.41■□□□□ 0.06
SMN1-204ENST00000506163 IFT27Q9BW83 186 aa15.41■□□□□ 0.06
SMN1-204ENST00000506163 CACNG6Q9BXT2 260 aa15.41■□□□□ 0.06
SMN1-204ENST00000506163 NDEL1Q9GZM8 345 aa15.41■□□□□ 0.06
SMN1-204ENST00000506163 NUAK2Q9H093 628 aa15.41■□□□□ 0.06
SMN1-204ENST00000506163 RNF121Q9H920 327 aa15.41■□□□□ 0.06
SMN1-204ENST00000506163 EMC7Q9NPA0 242 aa15.41■□□□□ 0.06
SMN1-204ENST00000506163 POLE4Q9NR33 117 aa15.41■□□□□ 0.06
SMN1-204ENST00000506163 IL20Q9NYY1 176 aa15.41■□□□□ 0.06
SMN1-204ENST00000506163 CDH10Q9Y6N8 788 aa15.41■□□□□ 0.06
SMN1-204ENST00000506163 A0A1W2PPL8 197 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 TMEM129A0AVI4 362 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 GPRIN2O60269 458 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 SLC16A7O60669 478 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 FKBP6O75344 327 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 MPZL1O95297 269 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 GPANK1O95872 356 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 OR4A8P0C604 315 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 RASSF2P50749 326 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 PSG4Q00888 419 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 PABPC1L2AQ5JQF8 200 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 CLEC12AQ5QGZ9 265 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 ZNF362Q5T0B9 420 aaPredicted RBP15.4■□□□□ 0.06
SMN1-204ENST00000506163 PRSS57Q6UWY2 283 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 RASSF6Q6ZTQ3 369 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 ASRGL1Q7L266 308 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 DPPA2Q7Z7J5 298 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 HS3ST5Q8IZT8 346 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 UTP4Q969X6 686 aaKnown RBP15.4■□□□□ 0.06
SMN1-204ENST00000506163 NMNAT3Q96T66 252 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 DDOQ99489 341 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 ZNF416Q9BWM5 594 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 DGCR6LQ9BY27 220 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 WNT5BQ9H1J7 359 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 NTN4Q9HB63 628 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 COA3Q9Y2R0 106 aaPredicted RBP15.4■□□□□ 0.06
SMN1-204ENST00000506163 MTORP42345 2549 aa15.4■□□□□ 0.06
SMN1-204ENST00000506163 BHLHE40O14503 412 aa15.39■□□□□ 0.05
SMN1-204ENST00000506163 CST2P09228 141 aa15.39■□□□□ 0.05
SMN1-204ENST00000506163 SERPINF1P36955 418 aa15.39■□□□□ 0.05
SMN1-204ENST00000506163 CBX1P83916 185 aa15.39■□□□□ 0.05
SMN1-204ENST00000506163 SNTB2Q13425 540 aaKnown RBP15.39■□□□□ 0.05
SMN1-204ENST00000506163 DAG1Q14118 895 aa15.39■□□□□ 0.05
SMN1-204ENST00000506163 SLC35F1Q5T1Q4 408 aa15.39■□□□□ 0.05
SMN1-204ENST00000506163 TMEM53Q6P2H8 277 aa15.39■□□□□ 0.05
SMN1-204ENST00000506163 ADCK1Q86TW2 530 aa15.39■□□□□ 0.05
SMN1-204ENST00000506163 OR6V1Q8N148 313 aa15.39■□□□□ 0.05
SMN1-204ENST00000506163 SLC30A7Q8NEW0 376 aa15.39■□□□□ 0.05
SMN1-204ENST00000506163 OR10G2Q8NGC3 310 aa15.39■□□□□ 0.05
SMN1-204ENST00000506163 AKR7LQ8NHP1 331 aa15.39■□□□□ 0.05
SMN1-204ENST00000506163 Q96MF0 132 aa15.39■□□□□ 0.05
SMN1-204ENST00000506163 FEVQ99581 238 aa15.39■□□□□ 0.05
SMN1-204ENST00000506163 RERGLQ9H628 205 aa15.39■□□□□ 0.05
SMN1-204ENST00000506163 ZNF442Q9H7R0 627 aa15.39■□□□□ 0.05
SMN1-204ENST00000506163 LOC100509620A0A075B734 347 aa15.38■□□□□ 0.05
SMN1-204ENST00000506163 OR6C68A6NDL8 312 aa15.38■□□□□ 0.05
SMN1-204ENST00000506163 ENTPD5O75356 428 aa15.38■□□□□ 0.05
SMN1-204ENST00000506163 SOX14O95416 240 aa15.38■□□□□ 0.05
SMN1-204ENST00000506163 CD99P14209 185 aa15.38■□□□□ 0.05
SMN1-204ENST00000506163 MSR1P21757 451 aa15.38■□□□□ 0.05
SMN1-204ENST00000506163 APEX1P27695 318 aaKnown RBP15.38■□□□□ 0.05
SMN1-204ENST00000506163 CCNIQ14094 377 aa15.38■□□□□ 0.05
SMN1-204ENST00000506163 LEG1Q6P5S2 330 aa15.38■□□□□ 0.05
SMN1-204ENST00000506163 CIARTQ8N365 385 aaPredicted RBP15.38■□□□□ 0.05
SMN1-204ENST00000506163 NPEPL1Q8NDH3 523 aa15.38■□□□□ 0.05
SMN1-204ENST00000506163 OR4Q3Q8NH05 313 aa15.38■□□□□ 0.05
SMN1-204ENST00000506163 GIPC3Q8TF64 312 aa15.38■□□□□ 0.05
SMN1-204ENST00000506163 OR2H1Q9GZK4 316 aa15.38■□□□□ 0.05
SMN1-204ENST00000506163 REV1Q9UBZ9 1251 aa15.38■□□□□ 0.05
SMN1-204ENST00000506163 B9D1Q9UPM9 204 aa15.38■□□□□ 0.05
SMN1-204ENST00000506163 IGLV1-36A0A0B4J1U3 117 aa15.37■□□□□ 0.05
SMN1-204ENST00000506163 TRIM64A6NGJ6 449 aa15.37■□□□□ 0.05
SMN1-204ENST00000506163 TRIM64BA6NI03 449 aa15.37■□□□□ 0.05
SMN1-204ENST00000506163 KHDRBS3O75525 346 aaKnown RBP15.37■□□□□ 0.05
SMN1-204ENST00000506163 PRKACGP22612 351 aa15.37■□□□□ 0.05
SMN1-204ENST00000506163 EFNB3Q15768 340 aa15.37■□□□□ 0.05
SMN1-204ENST00000506163 CD300LDQ6UXZ3 194 aa15.37■□□□□ 0.05
SMN1-204ENST00000506163 OR52E2Q8NGJ4 325 aa15.37■□□□□ 0.05
SMN1-204ENST00000506163 TRMT61AQ96FX7 289 aaKnown RBP15.37■□□□□ 0.05
SMN1-204ENST00000506163 POM121L2Q96KW2 1035 aa15.37■□□□□ 0.05
SMN1-204ENST00000506163 DOK1Q99704 481 aa15.37■□□□□ 0.05
SMN1-204ENST00000506163 MMADHCQ9H3L0 296 aaPredicted RBP15.37■□□□□ 0.05
SMN1-204ENST00000506163 FN3KQ9H479 309 aa15.37■□□□□ 0.05
SMN1-204ENST00000506163 PLK3Q9H4B4 646 aa15.37■□□□□ 0.05
SMN1-204ENST00000506163 SRA1Q9HD15 236 aaKnown RBP15.37■□□□□ 0.05
SMN1-204ENST00000506163 CCNB1IP1Q9NPC3 277 aa15.37■□□□□ 0.05
SMN1-204ENST00000506163 PDP1Q9P0J1 537 aaPredicted RBP15.37■□□□□ 0.05
SMN1-204ENST00000506163 FBXL3Q9UKT7 428 aa15.37■□□□□ 0.05
SMN1-204ENST00000506163 FAM171A2A8MVW0 826 aa15.36■□□□□ 0.05
SMN1-204ENST00000506163 H7C417 338 aa15.36■□□□□ 0.05
SMN1-204ENST00000506163 IDH3BO43837 385 aa15.36■□□□□ 0.05
SMN1-204ENST00000506163 TIPRLO75663 272 aa15.36■□□□□ 0.05
SMN1-204ENST00000506163 GAAP10253 952 aa15.36■□□□□ 0.05
SMN1-204ENST00000506163 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.36■□□□□ 0.05
SMN1-204ENST00000506163 GK3PQ14409 553 aa15.36■□□□□ 0.05
SMN1-204ENST00000506163 ZNF774Q6NX45 483 aa15.36■□□□□ 0.05
SMN1-204ENST00000506163 DNM1P46Q6ZS02 220 aa15.36■□□□□ 0.05
SMN1-204ENST00000506163 LRP11Q86VZ4 500 aa15.36■□□□□ 0.05
SMN1-204ENST00000506163 SDR9C7Q8NEX9 313 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms