RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 CYLC2Q14093 348 aaPredicted RBP17.88■□□□□ 0.45
SQSTM1-210ENST00000506042 AWAT1Q58HT5 328 aa17.88■□□□□ 0.45
SQSTM1-210ENST00000506042 C10orf111Q8N326 155 aa17.88■□□□□ 0.45
SQSTM1-210ENST00000506042 LRRC17Q8N6Y2 441 aa17.88■□□□□ 0.45
SQSTM1-210ENST00000506042 NPEPL1Q8NDH3 523 aa17.88■□□□□ 0.45
SQSTM1-210ENST00000506042 STON2Q8WXE9 905 aa17.88■□□□□ 0.45
SQSTM1-210ENST00000506042 EBF4Q9BQW3 602 aa17.88■□□□□ 0.45
SQSTM1-210ENST00000506042 MRPL13Q9BYD1 178 aaKnown RBP17.88■□□□□ 0.45
SQSTM1-210ENST00000506042 NANOGQ9H9S0 305 aa17.88■□□□□ 0.45
SQSTM1-210ENST00000506042 NDRG4Q9ULP0 352 aaKnown RBP17.88■□□□□ 0.45
SQSTM1-210ENST00000506042 TIMM10BQ9Y5J6 103 aa17.88■□□□□ 0.45
SQSTM1-210ENST00000506042 TIMM8AO60220 97 aaPredicted RBP17.87■□□□□ 0.45
SQSTM1-210ENST00000506042 TRMUO75648 421 aaKnown RBP17.87■□□□□ 0.45
SQSTM1-210ENST00000506042 IGHV1-46P01743 117 aa17.87■□□□□ 0.45
SQSTM1-210ENST00000506042 MMP7P09237 267 aaPredicted RBP17.87■□□□□ 0.45
SQSTM1-210ENST00000506042 ZNF133P52736 654 aaPredicted RBP17.87■□□□□ 0.45
SQSTM1-210ENST00000506042 UGT2B15P54855 530 aa17.87■□□□□ 0.45
SQSTM1-210ENST00000506042 MTPNP58546 118 aa17.87■□□□□ 0.45
SQSTM1-210ENST00000506042 PPP1CBP62140 327 aa17.87■□□□□ 0.45
SQSTM1-210ENST00000506042 THEM4Q5T1C6 240 aa17.87■□□□□ 0.45
SQSTM1-210ENST00000506042 AGBL2Q5U5Z8 902 aa17.87■□□□□ 0.45
SQSTM1-210ENST00000506042 DLEU7Q6UYE1 221 aa17.87■□□□□ 0.45
SQSTM1-210ENST00000506042 PTOV1Q86YD1 416 aa17.87■□□□□ 0.45
SQSTM1-210ENST00000506042 ABHD4Q8TB40 342 aa17.87■□□□□ 0.45
SQSTM1-210ENST00000506042 KLF14Q8TD94 323 aaPredicted RBP17.87■□□□□ 0.45
SQSTM1-210ENST00000506042 MAGEB18Q96M61 343 aa17.87■□□□□ 0.45
SQSTM1-210ENST00000506042 SEPHS2Q99611 448 aa17.87■□□□□ 0.45
SQSTM1-210ENST00000506042 ALG12Q9BV10 488 aa17.87■□□□□ 0.45
SQSTM1-210ENST00000506042 SH3GLB1Q9Y371 365 aa17.87■□□□□ 0.45
SQSTM1-210ENST00000506042 A6NIZ1 184 aa17.86■□□□□ 0.45
SQSTM1-210ENST00000506042 C12orf71A8MTZ7 269 aa17.86■□□□□ 0.45
SQSTM1-210ENST00000506042 OR5F1O95221 314 aa17.86■□□□□ 0.45
SQSTM1-210ENST00000506042 ZNF32P17041 273 aa17.86■□□□□ 0.45
SQSTM1-210ENST00000506042 RAP1BP61224 184 aa17.86■□□□□ 0.45
SQSTM1-210ENST00000506042 RAP1AP62834 184 aa17.86■□□□□ 0.45
SQSTM1-210ENST00000506042 UBA52P62987 128 aaKnown RBP17.86■□□□□ 0.45
SQSTM1-210ENST00000506042 LCN2P80188 198 aa17.86■□□□□ 0.45
SQSTM1-210ENST00000506042 TNFAIP6P98066 277 aaPredicted RBP17.86■□□□□ 0.45
SQSTM1-210ENST00000506042 FAM27BQ5VT28 67 aa17.86■□□□□ 0.45
SQSTM1-210ENST00000506042 GPR32P1Q8NGA4 272 aa17.86■□□□□ 0.45
SQSTM1-210ENST00000506042 TMEM239Q8WW34 195 aa17.86■□□□□ 0.45
SQSTM1-210ENST00000506042 IPCEF1Q8WWN9 437 aaPredicted RBP17.86■□□□□ 0.45
SQSTM1-210ENST00000506042 POM121L2Q96KW2 1035 aa17.86■□□□□ 0.45
SQSTM1-210ENST00000506042 SIKE1Q9BRV8 207 aa17.86■□□□□ 0.45
SQSTM1-210ENST00000506042 RSPO3Q9BXY4 272 aaPredicted RBP17.86■□□□□ 0.45
SQSTM1-210ENST00000506042 TXNIPQ9H3M7 391 aa17.86■□□□□ 0.45
SQSTM1-210ENST00000506042 KAT8Q9H7Z6 458 aaKnown RBP17.86■□□□□ 0.45
SQSTM1-210ENST00000506042 NPTNQ9Y639 398 aa17.86■□□□□ 0.45
SQSTM1-210ENST00000506042 IFNL4K9M1U5 179 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 CD55P08174 381 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 CST2P09228 141 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 EGR1P18146 543 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 MAKP20794 623 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 CPT2P23786 658 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 VMACQ2NL98 169 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 ANKDD1AQ495B1 522 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 ALG10Q5BKT4 473 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 MTX3Q5HYI7 312 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 SPATA46Q5T0L3 261 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 ERICH5Q6P6B1 374 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 SYT9Q86SS6 491 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 WDFY1Q8IWB7 410 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 OR10A6Q8NH74 314 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 SLC25A40Q8TBP6 338 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 SLC25A28Q96A46 364 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 MARS2Q96GW9 593 aaKnown RBP17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 ECSITQ9BQ95 431 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 WFDC6Q9BQY6 131 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 OR2J1Q9GZK6 312 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 MAN2C1Q9NTJ4 1040 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 OR5V1Q9UGF6 321 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 NUP50Q9UKX7 468 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 AUP1Q9Y679 476 aa17.85■□□□□ 0.45
SQSTM1-210ENST00000506042 ANK2Q01484 3957 aa17.84■□□□□ 0.45
SQSTM1-210ENST00000506042 HKR1P10072 659 aa17.84■□□□□ 0.45
SQSTM1-210ENST00000506042 AQP2P41181 271 aa17.84■□□□□ 0.45
SQSTM1-210ENST00000506042 MMP15P51511 669 aa17.84■□□□□ 0.45
SQSTM1-210ENST00000506042 ESCO2Q56NI9 601 aa17.84■□□□□ 0.45
SQSTM1-210ENST00000506042 C1orf229Q6ZS94 237 aaPredicted RBP17.84■□□□□ 0.45
SQSTM1-210ENST00000506042 CCDC80Q76M96 950 aa17.84■□□□□ 0.45
SQSTM1-210ENST00000506042 MUC20Q8N307 709 aaPredicted RBP17.84■□□□□ 0.45
SQSTM1-210ENST00000506042 LIPHQ8WWY8 451 aa17.84■□□□□ 0.45
SQSTM1-210ENST00000506042 NSMAFQ92636 917 aa17.84■□□□□ 0.45
SQSTM1-210ENST00000506042 ZNF747Q9BV97 191 aa17.84■□□□□ 0.45
SQSTM1-210ENST00000506042 MEPEQ9NQ76 525 aaPredicted RBP17.84■□□□□ 0.45
SQSTM1-210ENST00000506042 ICMTO60725 284 aa17.83■□□□□ 0.44
SQSTM1-210ENST00000506042 UBOX5O94941 541 aa17.83■□□□□ 0.44
SQSTM1-210ENST00000506042 SLC2A10O95528 541 aa17.83■□□□□ 0.44
SQSTM1-210ENST00000506042 ABHD16AO95870 558 aa17.83■□□□□ 0.44
SQSTM1-210ENST00000506042 AVPP01185 164 aa17.83■□□□□ 0.44
SQSTM1-210ENST00000506042 SBK2P0C263 348 aa17.83■□□□□ 0.44
SQSTM1-210ENST00000506042 PRTN3P24158 256 aa17.83■□□□□ 0.44
SQSTM1-210ENST00000506042 MTNR1AP48039 350 aa17.83■□□□□ 0.44
SQSTM1-210ENST00000506042 ERVK-25P63136 954 aa17.83■□□□□ 0.44
SQSTM1-210ENST00000506042 ST3GAL3Q11203 375 aa17.83■□□□□ 0.44
SQSTM1-210ENST00000506042 TMEM155Q4W5P6 130 aa17.83■□□□□ 0.44
SQSTM1-210ENST00000506042 RBM45Q8IUH3 476 aaKnown RBP17.83■□□□□ 0.44
SQSTM1-210ENST00000506042 LZICQ8WZA0 190 aa17.83■□□□□ 0.44
SQSTM1-210ENST00000506042 TAMM41Q96BW9 452 aa17.83■□□□□ 0.44
SQSTM1-210ENST00000506042 C4orf45Q96LM5 186 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms