RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 ZNF407Q9C0G0 2248 aa1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 MYO16Q9Y6X6 1858 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 TRAV26-1A0A087WT03 109 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 C5orf63A6NC05 138 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 GOSR2O14653 212 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 B3GALNT1O75752 331 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 ERLIN2O94905 339 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 CD74P04233 296 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 C2P06681 752 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 ZNF735P0CB33 412 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 LGALS3P17931 250 aaKnown RBP1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 DTYMKP23919 212 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 HSD17B2P37059 387 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 VHLP40337 213 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 FBXW4P57775 412 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 FGL1Q08830 312 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 TCP10Q12799 353 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 CDC37Q16543 378 aaPredicted RBP1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 METTL21CQ5VZV1 264 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 Q6ZPB1 254 aaPredicted RBP1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 ST20-AS1Q8NBB2 130 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 OR10R2Q8NGX6 335 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 OR6N1Q8NGY5 312 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 OR13G1Q8NGZ3 307 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 LILRB4Q8NHJ6 448 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 C12orf42Q96LP6 360 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 SH3GL1Q99961 368 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 OR52D1Q9H346 318 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 SLC38A10Q9HBR0 1119 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 KLHL28Q9NXS3 571 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 CDH9Q9ULB4 789 aa1.35□□□□□ -2.19
HMGB1P29-201ENST00000505659 PCNX2A6NKB5 2137 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 LTBP4Q8N2S1 1624 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 A0A1B0GVL5 298 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 A0A1W2PPV9 198 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 H0YJW9 148 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 DNASE2O00115 360 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 SOCS1O15524 211 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 PEX11AO75192 247 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 SSTR5P35346 364 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 GDI2P50395 445 aaKnown RBP1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 ZNF77Q15935 545 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 ANKRD22Q5VYY1 191 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 SLC25A24Q6NUK1 477 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 SLC16A13Q7RTY0 426 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 TMEM135Q86UB9 458 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 PSTKQ8IV42 348 aaKnown RBP1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 TMEM105Q8N8V8 129 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 FAM83FQ8NEG4 500 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 OR10J6PQ8NGY7 276 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 PIFOQ8TCI5 191 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 RLN3Q8WXF3 142 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 SLC25A46Q96AG3 418 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 PIK3IP1Q96FE7 263 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 COL21A1Q96P44 957 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 ANGPTL4Q9BY76 406 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 KRTAP4-1Q9BYQ7 146 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 ANKRD19PQ9H560 264 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 AZI2Q9H6S1 392 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 KCNJ16Q9NPI9 418 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 HPF1Q9NWY4 346 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 PIGLQ9Y2B2 252 aa1.34□□□□□ -2.19
HMGB1P29-201ENST00000505659 NLRC5Q86WI3 1866 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 IGHV3OR16-8A0A075B7F1 116 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 IGHV1OR15-9A0A0B4J2B8 117 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 POLR1CO15160 346 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 DPM1O60762 260 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 SNNO75324 88 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 HLA-DQB1P01920 261 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 HEXBP07686 556 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 OR8U9P0C7N5 309 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 EPS15P42566 896 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 RBX1P62877 108 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 ACTG2P63267 376 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 CLINT1Q14677 625 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 ORMDL2Q53FV1 153 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 OR2A2Q6IF42 318 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 SLC25A48Q6ZT89 311 aaKnown RBP1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 CDKL3Q8IVW4 592 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 ZFP41Q8N8Y5 198 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 GMCL1P1Q8NEA9 526 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 SDR9C7Q8NEX9 313 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 OR5M1Q8NGP8 315 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 OR1L4Q8NGR5 311 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 SHC3Q92529 594 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 TVP23CQ96ET8 276 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 C16orf45Q96MC5 204 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 TIMM17AQ99595 171 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 EPS15L1Q9UBC2 864 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 SNX6Q9UNH7 406 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 ST3GAL6Q9Y274 331 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 N6AMT1Q9Y5N5 214 aa1.33□□□□□ -2.2
HMGB1P29-201ENST00000505659 CAMTA1Q9Y6Y1 1673 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 A0A1B0GW55 424 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 ZNF98A6NK75 572 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 PPP1R2P9O14990 202 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 ANGPT2O15123 496 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 TIMM8AO60220 97 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 FGGP02679 453 aa1.32□□□□□ -2.2
HMGB1P29-201ENST00000505659 DUX4L2P0CJ85 424 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms