RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 ADI1Q9BV57 179 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 RBM24Q9BX46 236 aaKnown RBP4.31□□□□□ -1.72
LMNB1-208ENST00000504788 SEC61A2Q9H9S3 476 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 ZNF556Q9HAH1 456 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 RPRD1BQ9NQG5 326 aaKnown RBP4.31□□□□□ -1.72
LMNB1-208ENST00000504788 POLE4Q9NR33 117 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 SLC17A5Q9NRA2 495 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 TBC1D23Q9NUY8 699 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 HAO2Q9NYQ3 351 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 CYB5R1Q9UHQ9 305 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 COA3Q9Y2R0 106 aaPredicted RBP4.31□□□□□ -1.72
LMNB1-208ENST00000504788 LHFPL6Q9Y693 200 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 COMMD3-BMI1R4GMX3 469 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 ABCA12Q86UK0 2595 aa4.31□□□□□ -1.72
LMNB1-208ENST00000504788 ARFGEF3Q5TH69 2177 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 ZNF726A6NNF4 738 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 DEFB108AA8MXU0 73 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 EEF1E1-BLOC1S5C9J1V9 151 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 ZNF587BE7ETH6 402 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 H0YHG0 523 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 PRODHO43272 600 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 EEF1E1O43324 174 aaKnown RBP4.3□□□□□ -1.72
LMNB1-208ENST00000504788 AKAP8O43823 692 aaKnown RBP4.3□□□□□ -1.72
LMNB1-208ENST00000504788 SLC16A7O60669 478 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 RAD51DO75771 328 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 PATE4P0C8F1 98 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 B4GALT1P15291 398 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 ZNF14P17017 642 aaPredicted RBP4.3□□□□□ -1.72
LMNB1-208ENST00000504788 POU1F1P28069 291 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 LAP3P28838 519 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 OTX1P32242 354 aaPredicted RBP4.3□□□□□ -1.72
LMNB1-208ENST00000504788 SH3BGRP55822 239 aaPredicted RBP4.3□□□□□ -1.72
LMNB1-208ENST00000504788 HSF2Q03933 536 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 HGFACQ04756 655 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 CD47Q08722 323 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 GGTLC2Q14390 218 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 OCLNQ16625 522 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 SMN1Q16637 294 aaKnown RBP4.3□□□□□ -1.72
LMNB1-208ENST00000504788 MEP1BQ16820 701 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 TEX30Q5JUR7 227 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 TIMM23BQ5SRD1 257 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 ZNF684Q5T5D7 378 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 C9orf135Q5VTT2 229 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 NXNL2Q5VZ03 156 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 PLBD1Q6P4A8 553 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 ANKRD16Q6P6B7 361 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 KLHL24Q6TFL4 600 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 HDDC2Q7Z4H3 204 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 ZNF100Q8IYN0 542 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 ZNF295-AS1Q8N0V1 137 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 C17orf78Q8N4C9 275 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 SLC22A24Q8N4F4 322 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 RFLNBQ8N5W9 214 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 FAM169BQ8N8A8 192 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 TCEANCQ8N8B7 351 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 CPEB3Q8NE35 698 aaKnown RBP4.3□□□□□ -1.72
LMNB1-208ENST00000504788 OR52L1Q8NGH7 329 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 OR51L1Q8NGJ5 315 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 OR8J1Q8NGP2 316 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 LILRB1Q8NHL6 650 aaPredicted RBP4.3□□□□□ -1.72
LMNB1-208ENST00000504788 TRUB1Q8WWH5 349 aaKnown RBP4.3□□□□□ -1.72
LMNB1-208ENST00000504788 C11orf40Q8WZ69 217 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 MAP6Q96JE9 813 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 FOXN4Q96NZ1 517 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 AMELYQ99218 206 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 TEAD3Q99594 435 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 RHNO1Q9BSD3 238 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 TMEM204Q9BSN7 226 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 ZNF416Q9BWM5 594 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 ANKRD60Q9BZ19 345 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 ULBP2Q9BZM5 246 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 ACTR6Q9GZN1 396 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 RIBC2Q9H4K1 309 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 WDR76Q9H967 626 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 SIAEQ9HAT2 523 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 SRA1Q9HD15 236 aaKnown RBP4.3□□□□□ -1.72
LMNB1-208ENST00000504788 KCNJ16Q9NPI9 418 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 MRPS18AQ9NVS2 196 aaKnown RBP4.3□□□□□ -1.72
LMNB1-208ENST00000504788 TVP23BQ9NYZ1 205 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 UBAP1Q9NZ09 502 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 KLHL21Q9UJP4 597 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 KLHDC2Q9Y2U9 406 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 SETXQ7Z333 2677 aaKnown RBP4.3□□□□□ -1.72
LMNB1-208ENST00000504788 LOC100509620A0A075B734 347 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 A0A096LPE4 126 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 A0A1W2PPZ6 126 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 A0A1W2PR80 420 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 TRIM64A6NGJ6 449 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 FAM171A2A8MVW0 826 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 C16orf97H3BN30 126 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 TLX2O43763 284 aaPredicted RBP4.3□□□□□ -1.72
LMNB1-208ENST00000504788 GLCEO94923 617 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 HMGN1P05114 100 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 CELA3BP08861 270 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 EPXP11678 715 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 ZNF35P13682 527 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 ZNF3P17036 446 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 CRYGSP22914 178 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 GSTT1P30711 240 aa4.3□□□□□ -1.72
LMNB1-208ENST00000504788 PYCR1P32322 319 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms