RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 IGHV1-46P01743 117 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 IGHV2-70P01814 119 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 PATE4P0C8F1 98 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 FAM157BP0CG42 384 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 ZNF32P17041 273 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 FUT1P19526 365 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 PRTN3P24158 256 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 GZMMP51124 257 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 BPIFB3P59826 476 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 PCBD1P61457 104 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 UBA52P62987 128 aaKnown RBP5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 CDK5R2Q13319 367 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 CYP51A1Q16850 503 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 ZNF181Q2M3W8 571 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 VMACQ2NL98 169 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 PABPC1L2AQ5JQF8 200 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 AGBL2Q5U5Z8 902 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 ERICH5Q6P6B1 374 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 SLC25A47Q6Q0C1 308 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 USP51Q70EK9 711 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 NANOGNBQ7Z5D8 188 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 DHDDSQ86SQ9 333 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 LSRQ86X29 649 aaPredicted RBP5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 LRRC28Q86X40 367 aaPredicted RBP5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 ZNF101Q8IZC7 436 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 BPIFB2Q8N4F0 458 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 SPICQ8N5J4 248 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 LRRC17Q8N6Y2 441 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 ZNF283Q8N7M2 679 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 SMYD1Q8NB12 490 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 NPEPL1Q8NDH3 523 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 DEFB108BQ8NET1 73 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 OR8J3Q8NGG0 315 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 OR4D11Q8NGI4 311 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 LRRC8CQ8TDW0 803 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 ST7LQ8TDW4 575 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 TAMM41Q96BW9 452 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 LRRC58Q96CX6 371 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 SAMD8Q96LT4 415 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 TSPAN32Q96QS1 320 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 ZNF347Q96SE7 839 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 SH3GL3Q99963 347 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 EBF4Q9BQW3 602 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 TXNIPQ9H3M7 391 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 PRDM13Q9H4Q3 707 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 NANOGQ9H9S0 305 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 PATZ1Q9HBE1 687 aaKnown RBP5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 INIPQ9NRY2 104 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 MAN2C1Q9NTJ4 1040 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 DDX28Q9NUL7 540 aaKnown RBP5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 PLEK2Q9NYT0 353 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 IL19Q9UHD0 177 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 IL20RAQ9UHF4 553 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 ATPIF1Q9UII2 106 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 NUP50Q9UKX7 468 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 NDRG4Q9ULP0 352 aaKnown RBP5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 SLC7A7Q9UM01 511 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 TIMM10BQ9Y5J6 103 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 NPTNQ9Y639 398 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 LOC100509620A0A075B734 347 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 A0A1B0GUS0 222 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 A0A1B0GWJ7 208 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 A6NIZ1 184 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 CPSF4LA6NMK7 179 aaKnown RBP5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 MCIDASD6RGH6 385 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 F5H0A9 414 aaPredicted RBP5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 BLOC1S5-TXNDC5H3BN57 136 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 M0R3H8 397 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 ANGPT2O15123 496 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 TMPRSS2O15393 492 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 CDC14BO60729 498 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 SERPINI2O75830 405 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 IFNA14P01570 189 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 RNASE1P07998 156 aaKnown RBP5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 UMPSP11172 480 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 CCL2P13500 99 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 ZNF12P17014 697 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 KITLGP21583 273 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 AQP1P29972 269 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 WNT5AP41221 380 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 SLC6A9P48067 706 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 SLC9A3P48764 834 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 GDI2P50395 445 aaKnown RBP5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 ARHGDIAP52565 204 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 CRYBA2P53672 197 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 RAP1BP61224 184 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 RPL15P61313 204 aaKnown RBP5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 ERVS71-1P61550 626 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 RAP1AP62834 184 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 IL13RA1P78552 427 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 PSG4Q00888 419 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 MVKQ03426 396 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 HSF2Q03933 536 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 PAX8Q06710 450 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 ZNF154Q13106 437 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 MELKQ14680 651 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 C11orf91Q3C1V1 193 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 AGKQ53H12 422 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 MTX3Q5HYI7 312 aa5.16□□□□□ -1.58
LSM3P4-201ENST00000502948 BEND6Q5SZJ8 279 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms