RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 CREB3L2Q70SY1 520 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 ZNF767PQ75MW2 155 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 OR52I2Q8NH67 350 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 SAP25Q8TEE9 199 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 C8orf44Q96CB5 159 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 CMKLR1Q99788 373 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 CRB3Q9BUF7 120 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 OR11A1Q9GZK7 315 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 MRPL22Q9NWU5 206 aaKnown RBP10.76□□□□□ -0.69
NUP54-202ENST00000502850 RCE1Q9Y256 329 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 R4GMQ9 66 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 MYO15AQ9UKN7 3530 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 IGHV3-20A0A0C4DH32 117 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 IGHV5-10-1A0A0J9YXX1 117 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 A0A1B0GUH1 482 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 ANKRD20A5PA0PJZ0 165 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 SLC17A2O00624 439 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 GLSO94925 669 aaPredicted RBP10.76□□□□□ -0.69
NUP54-202ENST00000502850 MT-ND4P03905 459 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 MAS1P04201 325 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 CSF1P09603 554 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 MYF5P13349 255 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 PSMB1P20618 241 aaKnown RBP10.76□□□□□ -0.69
NUP54-202ENST00000502850 ACHEP22303 614 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 CDK2P24941 298 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 CCL7P80098 99 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 FCN2Q15485 313 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 OR7A5Q15622 319 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 ZNF385CQ66K41 422 aaPredicted RBP10.76□□□□□ -0.69
NUP54-202ENST00000502850 PMS2CLQ68D20 193 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 TMEM205Q6UW68 189 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 LRRC69Q6ZNQ3 347 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 PRSS45Q7RTY3 260 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 WDR5BQ86VZ2 330 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 CATSPERDQ86XM0 798 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 IZUMO1Q8IYV9 350 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 CEP76Q8TAP6 659 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 GIMAP1Q8WWP7 306 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 DACT3Q96B18 629 aaPredicted RBP10.76□□□□□ -0.69
NUP54-202ENST00000502850 CCDC74BQ96LY2 380 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 C5orf34Q96MH7 638 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 ABHD6Q9BV23 337 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 WDR54Q9H977 334 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 HRASLSQ9HDD0 168 aa10.76□□□□□ -0.69
NUP54-202ENST00000502850 GPR179Q6PRD1 2367 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 TRAV8-7A0A075B6U6 113 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 LOC100289279A0A1B0GTE1 492 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 SIGLEC6O43699 453 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 SSNA1O43805 119 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 ISG15P05161 165 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 UBCP0CG48 685 aaKnown RBP10.75□□□□□ -0.69
NUP54-202ENST00000502850 RCVRNP35243 200 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 PTGS2P35354 604 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 CLDN12P56749 244 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 HSF1Q00613 529 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 FOXF1Q12946 379 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 IL11RAQ14626 422 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 MELKQ14680 651 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 PCK2Q16822 640 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 BTBD16Q32M84 506 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 C3orf33Q6P1S2 294 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 ANKRD16Q6P6B7 361 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 DNM1P46Q6ZS02 220 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 SLC35D2Q76EJ3 337 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 NKAIN3Q8N8D7 197 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 SLC26A10Q8NG04 563 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 SLC25A43Q8WUT9 341 aaPredicted RBP10.75□□□□□ -0.69
NUP54-202ENST00000502850 ORAI1Q96D31 301 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 MED30Q96HR3 178 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 KCNK17Q96T54 332 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 WDR77Q9BQA1 342 aaPredicted RBP10.75□□□□□ -0.69
NUP54-202ENST00000502850 METTL7AQ9H8H3 244 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 GPN1Q9HCN4 374 aaPredicted RBP10.75□□□□□ -0.69
NUP54-202ENST00000502850 MYOTQ9UBF9 498 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 ZNF222Q9UK12 451 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 FBXL3Q9UKT7 428 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 HHLA2Q9UM44 414 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 LRP12Q9Y561 859 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 WIF1Q9Y5W5 379 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 ZNF292O60281 2723 aa10.75□□□□□ -0.69
NUP54-202ENST00000502850 SEC16AO15027 2179 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 CACNA1EQ15878 2313 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 A0A0A6YYH2 397 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 A0A1W2PQM1 296 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 GGT3PA6NGU5 568 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 A6NJ64 397 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 LIPT2A6NK58 231 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 C17orf51A8MQB3 221 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.74□□□□□ -0.69
NUP54-202ENST00000502850 MS4A18H0YCH9 400 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 TP53I11O14683 189 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 RBBP9O75884 186 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 ADRB1P08588 477 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 FBXO45P0C2W1 286 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 SULT1A3P0DMM9 295 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 SULT1A4P0DMN0 295 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 FGF5P12034 268 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 NR2C1P13056 603 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 IFNGR1P15260 489 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 DCTDP32321 178 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms