RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 EIF3KQ9UBQ5 218 aaKnown RBP13.05□□□□□ -0.32
HDAC6-236ENST00000498808 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-236ENST00000498808 WDR91A4D1P6 747 aa13.04□□□□□ -0.32
HDAC6-236ENST00000498808 C3orf80F5H4A9 247 aa13.04□□□□□ -0.32
HDAC6-236ENST00000498808 H3BSA7 217 aa13.04□□□□□ -0.32
HDAC6-236ENST00000498808 SDHDO14521 159 aa13.04□□□□□ -0.32
HDAC6-236ENST00000498808 RNF13O43567 381 aa13.04□□□□□ -0.32
HDAC6-236ENST00000498808 TYROBPO43914 113 aa13.04□□□□□ -0.32
HDAC6-236ENST00000498808 ERLIN1O75477 346 aa13.04□□□□□ -0.32
HDAC6-236ENST00000498808 OR6A2O95222 327 aa13.04□□□□□ -0.32
HDAC6-236ENST00000498808 ZNF84P51523 738 aa13.04□□□□□ -0.32
HDAC6-236ENST00000498808 RGS8P57771 180 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-236ENST00000498808 NCALDP61601 193 aa13.04□□□□□ -0.32
HDAC6-236ENST00000498808 CEP85LQ5SZL2 805 aa13.04□□□□□ -0.32
HDAC6-236ENST00000498808 KPRPQ5T749 579 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-236ENST00000498808 RUSC1-AS1Q66K80 236 aa13.04□□□□□ -0.32
HDAC6-236ENST00000498808 AKR7LQ8NHP1 331 aa13.04□□□□□ -0.32
HDAC6-236ENST00000498808 ITLN1Q8WWA0 313 aa13.04□□□□□ -0.32
HDAC6-236ENST00000498808 THOC1Q96FV9 657 aaKnown RBP13.04□□□□□ -0.32
HDAC6-236ENST00000498808 SLC30A2Q9BRI3 323 aa13.04□□□□□ -0.32
HDAC6-236ENST00000498808 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-236ENST00000498808 LGALS13Q9UHV8 139 aa13.04□□□□□ -0.32
HDAC6-236ENST00000498808 HAO1Q9UJM8 370 aa13.04□□□□□ -0.32
HDAC6-236ENST00000498808 KIR2DS1A0A191URI9 304 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 H0YL77 283 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 TMEM178BH3BS89 294 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 TIMM8AO60220 97 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-236ENST00000498808 ICMTO60725 284 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 IGHG1P01857 330 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 IL6P05231 212 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 RPS2P15880 293 aaKnown RBP13.03□□□□□ -0.32
HDAC6-236ENST00000498808 TNFRSF1AP19438 455 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 CDAP32320 146 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 GDI2P50395 445 aaKnown RBP13.03□□□□□ -0.32
HDAC6-236ENST00000498808 CLRN1P58418 232 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 RPL15P61313 204 aaKnown RBP13.03□□□□□ -0.32
HDAC6-236ENST00000498808 PSG7Q13046 419 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 ZNF74Q16587 644 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 UNQ6126/PRO20091Q6UXV3 157 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 LINC00114Q6XXX2 140 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 ZNF620Q6ZNG0 422 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 Q6ZR03 302 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 KLBQ86Z14 1044 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 MUC20Q8N307 709 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-236ENST00000498808 NOXO1Q8NFA2 376 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 NABP1Q96AH0 204 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 SEPHS2Q99611 448 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 MRPL13Q9BYD1 178 aaKnown RBP13.03□□□□□ -0.32
HDAC6-236ENST00000498808 CCNB1IP1Q9NPC3 277 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 PNPOQ9NVS9 261 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 PPP1R3CQ9UQK1 317 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 POMT1Q9Y6A1 747 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 PLXNB1O43157 2135 aa13.03□□□□□ -0.32
HDAC6-236ENST00000498808 C5orf58C9J3I9 102 aa13.02□□□□□ -0.33
HDAC6-236ENST00000498808 ZNF205O95201 554 aa13.02□□□□□ -0.33
HDAC6-236ENST00000498808 CH25HO95992 272 aa13.02□□□□□ -0.33
HDAC6-236ENST00000498808 SLC1A6P48664 564 aa13.02□□□□□ -0.33
HDAC6-236ENST00000498808 MMP16P51512 607 aa13.02□□□□□ -0.33
HDAC6-236ENST00000498808 ZNF133P52736 654 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-236ENST00000498808 FGF12P61328 243 aa13.02□□□□□ -0.33
HDAC6-236ENST00000498808 GNB2P62879 340 aa13.02□□□□□ -0.33
HDAC6-236ENST00000498808 MRPS34P82930 218 aaKnown RBP13.02□□□□□ -0.33
HDAC6-236ENST00000498808 PSG4Q00888 419 aa13.02□□□□□ -0.33
HDAC6-236ENST00000498808 C2orf68Q2NKX9 166 aa13.02□□□□□ -0.33
HDAC6-236ENST00000498808 C10orf128Q5T292 105 aa13.02□□□□□ -0.33
HDAC6-236ENST00000498808 SWT1Q5T5J6 900 aaKnown RBP13.02□□□□□ -0.33
HDAC6-236ENST00000498808 SAMD5Q5TGI4 173 aa13.02□□□□□ -0.33
HDAC6-236ENST00000498808 GPR157Q5UAW9 335 aa13.02□□□□□ -0.33
HDAC6-236ENST00000498808 C1orf174Q8IYL3 243 aa13.02□□□□□ -0.33
HDAC6-236ENST00000498808 C10orf111Q8N326 155 aa13.02□□□□□ -0.33
HDAC6-236ENST00000498808 FITM2Q8N6M3 262 aa13.02□□□□□ -0.33
HDAC6-236ENST00000498808 OR2Z1Q8NG97 314 aa13.02□□□□□ -0.33
HDAC6-236ENST00000498808 NFKBIDQ8NI38 313 aa13.02□□□□□ -0.33
HDAC6-236ENST00000498808 DYRK2Q92630 601 aa13.02□□□□□ -0.33
HDAC6-236ENST00000498808 FAM71F1Q96KD3 344 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-236ENST00000498808 SIAEQ9HAT2 523 aa13.02□□□□□ -0.33
HDAC6-236ENST00000498808 TMEM165Q9HC07 324 aa13.02□□□□□ -0.33
HDAC6-236ENST00000498808 UGT2A1Q9Y4X1 527 aa13.02□□□□□ -0.33
HDAC6-236ENST00000498808 C5orf63A6NC05 138 aa13.01□□□□□ -0.33
HDAC6-236ENST00000498808 GPR137BO60478 399 aa13.01□□□□□ -0.33
HDAC6-236ENST00000498808 SLC2A10O95528 541 aa13.01□□□□□ -0.33
HDAC6-236ENST00000498808 TNFSF4P23510 183 aa13.01□□□□□ -0.33
HDAC6-236ENST00000498808 BPIFB3P59826 476 aa13.01□□□□□ -0.33
HDAC6-236ENST00000498808 ERVK-25P63136 954 aa13.01□□□□□ -0.33
HDAC6-236ENST00000498808 FADDQ13158 208 aa13.01□□□□□ -0.33
HDAC6-236ENST00000498808 C6orf10Q5SRN2 563 aa13.01□□□□□ -0.33
HDAC6-236ENST00000498808 SSMEM1Q8WWF3 244 aa13.01□□□□□ -0.33
HDAC6-236ENST00000498808 ANP32BQ92688 251 aaKnown RBP13.01□□□□□ -0.33
HDAC6-236ENST00000498808 ITCHQ96J02 903 aa13.01□□□□□ -0.33
HDAC6-236ENST00000498808 NUDT16L1Q9BRJ7 211 aaKnown RBP13.01□□□□□ -0.33
HDAC6-236ENST00000498808 WNT5BQ9H1J7 359 aa13.01□□□□□ -0.33
HDAC6-236ENST00000498808 KCNN2Q9H2S1 579 aa13.01□□□□□ -0.33
HDAC6-236ENST00000498808 POFUT1Q9H488 388 aa13.01□□□□□ -0.33
HDAC6-236ENST00000498808 WDR55Q9H6Y2 383 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-236ENST00000498808 NANSQ9NR45 359 aa13.01□□□□□ -0.33
HDAC6-236ENST00000498808 IL19Q9UHD0 177 aa13.01□□□□□ -0.33
HDAC6-236ENST00000498808 IGKV1D-43A0A0B4J1Z2 117 aa13□□□□□ -0.33
HDAC6-236ENST00000498808 CLIC1O00299 241 aa13□□□□□ -0.33
HDAC6-236ENST00000498808 TNFRSF13BO14836 293 aaPredicted RBP13□□□□□ -0.33
HDAC6-236ENST00000498808 TRMUO75648 421 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms