RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	CSTB	P04080	98 aa	Known RBP	10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	SBK3	P0C264	359 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	SLC35G6	P0C7Q6	338 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	ZNF14	P17017	642 aa	Predicted RBP	10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	EPHA1	P21709	976 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	ITPKB	P27987	946 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	EFNA3	P52797	238 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	RNF151	Q2KHN1	245 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	C10orf91	Q5T1B1	145 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	TMEM88	Q6PEY1	159 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	DTWD1	Q8N5C7	304 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	OR9Q1	Q8NGQ5	310 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	OR2G2	Q8NGZ5	317 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	ZCCHC10	Q8TBK6	192 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	PCNP	Q8WW12	178 aa	Known RBP	10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	SPSB1	Q96BD6	273 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	WDFY2	Q96P53	400 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	TPPP3	Q9BW30	176 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	ACSS2	Q9NR19	701 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	CUTC	Q9NTM9	273 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	C14orf119	Q9NWQ9	140 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	MAP4K5	Q9Y4K4	846 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	TNFRSF18	Q9Y5U5	241 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	CDIPT	O14735	213 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	KLK8	O60259	260 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	MT-ND4L	P03901	98 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	SNRPC	P09234	159 aa	Known RBP	10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	C1GALT1C1L	P0DN25	315 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	MS4A2	Q01362	244 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	ZNF616	Q08AN1	781 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	BST1	Q10588	318 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	ADNP2	Q6IQ32	1131 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	RHBDD2	Q6NTF9	364 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	SLCO4C1	Q6ZQN7	724 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	RPS27L	Q71UM5	84 aa	Known RBP	10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	GOLGA7	Q7Z5G4	137 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	VN1R4	Q7Z5H5	301 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	NRM	Q8IXM6	262 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	FAM98A	Q8NCA5	519 aa	Known RBP	10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	OR5L2	Q8NGL0	311 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	CMBL	Q96DG6	245 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	DPH1	Q9BZG8	443 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	SPRY4	Q9C004	299 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	BHLHE41	Q9C0J9	482 aa	Predicted RBP	10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	SLC25A32	Q9H2D1	315 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	WDR55	Q9H6Y2	383 aa	Predicted RBP	10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	RASL12	Q9NYN1	266 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	CHRNA9	Q9UGM1	479 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	ZNF223	Q9UK11	482 aa	Predicted RBP	10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	EMCN	Q9ULC0	261 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	PADI1	Q9ULC6	663 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	ZNF490	Q9ULM2	529 aa	Predicted RBP	10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	PPP1R3C	Q9UQK1	317 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	SLC35A3	Q9Y2D2	325 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	NBEA	Q8NFP9	2946 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	PKD1L2	Q7Z442	2459 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	MGA	Q8IWI9	3026 aa		10.49	□□□□□ -0.73
BRCA1-222	ENST00000493919	LOC101059948	A0A1B0GTJ6	334 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919		A0A1B0GX78	115 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919		A0A1W2PNV4	684 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	HYKK	A2RU49	373 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	CYB5B	O43169	146 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	RGS14	O43566	566 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	TLX2	O43763	284 aa	Predicted RBP	10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	SNN	O75324	88 aa	Predicted RBP	10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	THRB	P10828	461 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	EPOR	P19235	508 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	MSR1	P21757	451 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	GNRHR	P30968	328 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	DLST	P36957	453 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	OR3A1	P47881	315 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	OPCML	Q14982	345 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	PCBP2	Q15366	365 aa	Known RBP eCLIP	10.48	□□□□□ -0.73	2e-7	■■■□□ 17.1
BRCA1-222	ENST00000493919	FCN2	Q15485	313 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	HIST2H3PS2	Q5TEC6	136 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	TMEM107	Q6UX40	140 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	LYG2	Q86SG7	212 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	CBLN2	Q8IUK8	224 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	GLB1L2	Q8IW92	636 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	TMEM151A	Q8N4L1	468 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	OR4K1	Q8NGD4	311 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	RDH11	Q8TC12	318 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	CT55	Q8WUE5	264 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	CENPN	Q96H22	339 aa	Predicted RBP	10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	NSUN5	Q96P11	429 aa	Known RBP	10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	DIRC2	Q96SL1	478 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	CITED1	Q99966	193 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	WWTR1	Q9GZV5	400 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	CHST8	Q9H2A9	424 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	SLCO5A1	Q9H2Y9	848 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	ACTR8	Q9H981	624 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	DNAJC4	Q9NNZ3	241 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	NGB	Q9NPG2	151 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	SEMA4B	Q9NPR2	832 aa	Predicted RBP	10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	SMCO4	Q9NRQ5	59 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	C1orf109	Q9NX04	203 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	SLC22A13	Q9Y226	551 aa		10.48	□□□□□ -0.73
BRCA1-222	ENST00000493919	PCDHB14	Q9Y5E9	798 aa		10.48	□□□□□ -0.73

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