RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 MCIDASD6RGH6 385 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 IFNL4K9M1U5 179 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 SURF4O15260 269 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 IGF2P01344 180 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 KITP10721 976 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 UMPSP11172 480 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 BPIFB3P59826 476 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 BTG1P62324 171 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 TNFAIP6P98066 277 aaPredicted RBP9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 MPP2Q14168 576 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 SLC9A3R2Q15599 337 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 NPTX1Q15818 432 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 ESCO2Q56NI9 601 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 MTX3Q5HYI7 312 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 KLF17Q5JT82 389 aaPredicted RBP9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 C16orf87Q6PH81 154 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 LRRC28Q86X40 367 aaPredicted RBP9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 ZNF101Q8IZC7 436 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 LRRC18Q8N456 261 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 ZNF283Q8N7M2 679 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 SLC25A40Q8TBP6 338 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 ADAMTS16Q8TE57 1224 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 GTF3AQ92664 365 aaKnown RBP9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 THOC1Q96FV9 657 aaKnown RBP9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 SAMD8Q96LT4 415 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 ARHGDIGQ99819 225 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 WACQ9BTA9 647 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 ZNF426Q9BUY5 554 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 OR2J1Q9GZK6 312 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 MMP26Q9NRE1 261 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 TMEM106BQ9NUM4 274 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 ZNF446Q9NWS9 450 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 TANC2Q9HCD6 1990 aa9.28□□□□□ -0.92
SNRNP200-207ENST00000493271 VWFP04275 2813 aa9.27□□□□□ -0.92
SNRNP200-207ENST00000493271 C5orf49A4QMS7 147 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 F5H0A9 414 aaPredicted RBP9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 TRAPPC2LH3BP13 241 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 SBK2P0C263 348 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 ACADSP16219 412 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 ZNF32P17041 273 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 GSTM3P21266 225 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 WNT5AP41221 380 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 GUCA1AP43080 201 aaPredicted RBP9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 SLC18A1P54219 525 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 PCBD1P61457 104 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 PAX8Q06710 450 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 CDK5R2Q13319 367 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 ENTPD8Q5MY95 495 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 BEND6Q5SZJ8 279 aaPredicted RBP9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 FAM27BQ5VT28 67 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 BLOC1S3Q6QNY0 202 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 BTNL3Q6UXE8 466 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 LRRN1Q6UXK5 716 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 C17orf107Q6ZR85 190 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 SLC30A8Q8IWU4 369 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 PARP8Q8N3A8 854 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 C11orf65Q8NCR3 313 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 NPEPL1Q8NDH3 523 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 OR52E2Q8NGJ4 325 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 OR4F5Q8NH21 305 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 VANGL1Q8TAA9 524 aaPredicted RBP9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 ABHD4Q8TB40 342 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 RASSF5Q8WWW0 418 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 GEMIN6Q8WXD5 167 aaKnown RBP9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 ASB10Q8WXI3 467 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 TMIGD2Q96BF3 282 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 SPDL1Q96EA4 605 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 MAGEB18Q96M61 343 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 ZNF48Q96MX3 618 aaPredicted RBP9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 DUX5Q96PT3 197 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 OR52B2Q96RD2 323 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 ZNF347Q96SE7 839 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 PCDHAC1Q9H158 963 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 CENPHQ9H3R5 247 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 NANOGQ9H9S0 305 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 BEX1Q9HBH7 125 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 MAN2C1Q9NTJ4 1040 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 VAPAQ9P0L0 249 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 IL19Q9UHD0 177 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 EGFL7Q9UHF1 273 aa9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 NDRG4Q9ULP0 352 aaKnown RBP9.27□□□□□ -0.93
SNRNP200-207ENST00000493271 TRBV5-3A0A0A0MS03 114 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 CPSF4LA6NMK7 179 aaKnown RBP9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 BLOC1S5-TXNDC5H3BN57 136 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 M0QZ24 198 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 TIMM23O14925 209 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 TRMUO75648 421 aaKnown RBP9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 FSTL3O95633 263 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 KNG1P01042 644 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 MDKP21741 143 aaPredicted RBP9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 AQP1P29972 269 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 MPV17P39210 176 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 MDH2P40926 338 aaKnown RBP9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 RBM34P42696 430 aaKnown RBP9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 UGT2B15P54855 530 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 PCBP3P57721 371 aaKnown RBP9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 RPL15P61313 204 aaKnown RBP9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 PPP1CBP62140 327 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 TAF11Q15544 211 aa9.26□□□□□ -0.93
SNRNP200-207ENST00000493271 DUSP7Q16829 419 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms