RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 PGGHGQ32M88 737 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 FAHD1Q6P587 224 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 UGT2A3Q6UWM9 527 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.13□□□□□ -0.47
CCM2-217ENST00000492883 MYPOPQ86VE0 399 aaPredicted RBP12.13□□□□□ -0.47
CCM2-217ENST00000492883 IQCF1Q8N6M8 205 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 CYB561A3Q8NBI2 242 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 SLC37A3Q8NCC5 494 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 OR4F15Q8NGB8 312 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 PIGTQ969N2 578 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 FBXO17Q96EF6 278 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 ZNF75AQ96N20 296 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 CCL19Q99731 98 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 PKP2Q99959 881 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 DHRS9Q9BPW9 319 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 ZNF416Q9BWM5 594 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 TEX12Q9BXU0 123 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 FN3KQ9H479 309 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 S100A14Q9HCY8 104 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 EMC7Q9NPA0 242 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 FAIMQ9NVQ4 179 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 LAMP3Q9UQV4 416 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 TIMM10BQ9Y5J6 103 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 FKBP7Q9Y680 259 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 FLNBO75369 2602 aaKnown RBP12.13□□□□□ -0.47
CCM2-217ENST00000492883 SAC3D1A6NKF1 404 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 RIIAD1A6NNX1 92 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 FAM171A2A8MVW0 826 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 H3BNX3 289 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 GPANK1O95872 356 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 HLA-DQA2P01906 255 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 HMGN1P05114 100 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 SCG5P05408 212 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 MMP7P09237 267 aaPredicted RBP12.12□□□□□ -0.47
CCM2-217ENST00000492883 ZNF3P17036 446 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 CD53P19397 219 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 CALCRP30988 508 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 GRK5P34947 590 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 GLO1Q04760 184 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 DBPQ10586 325 aaPredicted RBP12.12□□□□□ -0.47
CCM2-217ENST00000492883 CRMP1Q14194 572 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 PABPC1L2AQ5JQF8 200 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 ZNF362Q5T0B9 420 aaPredicted RBP12.12□□□□□ -0.47
CCM2-217ENST00000492883 OTPQ5XKR4 325 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 ACSM5Q6NUN0 579 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 VHLLQ6RSH7 139 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 B3GLCTQ6Y288 498 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 ALDH16A1Q8IZ83 802 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 SLC30A7Q8NEW0 376 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 OR2T4Q8NH00 348 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 C11orf40Q8WZ69 217 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 OTULINQ96BN8 352 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 WACQ9BTA9 647 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 RACGAP1Q9H0H5 632 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 KRT84Q9NSB2 600 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 OAZ3Q9UMX2 235 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 POLR1DQ9Y2S0 133 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 SPEF1Q9Y4P9 236 aa12.12□□□□□ -0.47
CCM2-217ENST00000492883 IGLV1-36A0A0B4J1U3 117 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 IGHV2OR16-5A0A0B4J2B6 119 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 VSTM5A8MXK1 200 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 APOBEC3AP31941 199 aaPredicted RBP12.11□□□□□ -0.47
CCM2-217ENST00000492883 PYCR1P32322 319 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 APLNRP35414 380 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 CRISP1P54107 249 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 LSM6P62312 80 aaKnown RBP12.11□□□□□ -0.47
CCM2-217ENST00000492883 CDK5Q00535 292 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 PSG4Q00888 419 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 GALK2Q01415 458 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 ENDOGQ14249 297 aaKnown RBP12.11□□□□□ -0.47
CCM2-217ENST00000492883 DEFB113Q30KQ7 82 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 AGAP6Q5VW22 663 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 TMEM236Q5W0B7 351 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 ZNF544Q6NX49 715 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 SYT9Q86SS6 491 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 ZBTB46Q86UZ6 589 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 ZNF584Q8IVC4 421 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 FBXL14Q8N1E6 418 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 CPEB3Q8NE35 698 aaKnown RBP12.11□□□□□ -0.47
CCM2-217ENST00000492883 PROKR2Q8NFJ6 384 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 OR10H5Q8NGA6 315 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 OR1J2Q8NGS2 313 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 AKR7LQ8NHP1 331 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 TMEM171Q8WVE6 324 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 STMN2Q93045 179 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 DDOQ99489 341 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 CDADC1Q9BWV3 514 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 OR2H1Q9GZK4 316 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 GABARAPL1Q9H0R8 117 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 C1orf198Q9H425 327 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 CDH20Q9HBT6 801 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 CMC2Q9NRP2 79 aa12.11□□□□□ -0.47
CCM2-217ENST00000492883 ANKRD65E5RJM6 399 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 MITFO75030 526 aaPredicted RBP12.1□□□□□ -0.47
CCM2-217ENST00000492883 BAG2O95816 211 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 SOD3P08294 240 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 DANCRP0C864 163 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 CCL2P13500 99 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 ZNF35P13682 527 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 CCNOP22674 350 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms