RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 PCGF2P35227 344 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 NCALDP61601 193 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 PSG4Q00888 419 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 PLP2Q04941 152 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 SLC3A1Q07837 685 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 CDK5R2Q13319 367 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 DUSP7Q16829 419 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 C10orf128Q5T292 105 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 ZNF774Q6NX45 483 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 C16orf87Q6PH81 154 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 SPATC1Q76KD6 591 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 FUNDC1Q8IVP5 155 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 PARP8Q8N3A8 854 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 KIR3DL3Q8N743 410 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 ZNF283Q8N7M2 679 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 SMYD1Q8NB12 490 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 NOXO1Q8NFA2 376 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 GPR32P1Q8NGA4 272 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 OR6T1Q8NGN1 323 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 MCHR1Q99705 422 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 ARHGDIGQ99819 225 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 CITED1Q99966 193 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 ZNF426Q9BUY5 554 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 MS4A7Q9GZW8 240 aaPredicted RBP11.1□□□□□ -0.63
USF1-206ENST00000491629 RAD21L1Q9H4I0 556 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 MEPEQ9NQ76 525 aaPredicted RBP11.1□□□□□ -0.63
USF1-206ENST00000491629 TMEM106BQ9NUM4 274 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 SELENONQ9NZV5 590 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 VAPAQ9P0L0 249 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 PLSCR5A0PG75 271 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 KPNA4O00629 521 aaPredicted RBP11.09□□□□□ -0.63
USF1-206ENST00000491629 POLR3GO15318 223 aaPredicted RBP11.09□□□□□ -0.63
USF1-206ENST00000491629 HOXA3O43365 443 aaPredicted RBP11.09□□□□□ -0.63
USF1-206ENST00000491629 CHP2O43745 196 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 ICMTO60725 284 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 ENTPD5O75356 428 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 TRMUO75648 421 aaKnown RBP11.09□□□□□ -0.63
USF1-206ENST00000491629 OR6A2O95222 327 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 IGHG1P01857 330 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 UGT2B15P54855 530 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 CLRN1P58418 232 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 MRPS34P82930 218 aaKnown RBP11.09□□□□□ -0.63
USF1-206ENST00000491629 HSF2Q03933 536 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 FMODQ06828 376 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 PSG7Q13046 419 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 SCARB2Q14108 478 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 KRT71Q3SY84 523 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 TMEM155Q4W5P6 130 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 PAGE3Q5JUK9 113 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 ENTPD8Q5MY95 495 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 CEP85LQ5SZL2 805 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 HIST2H2BDQ6DRA6 164 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 ZNF613Q6PF04 617 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 OR52E2Q8NGJ4 325 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 ASB10Q8WXI3 467 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 PKP2Q99959 881 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 PRSS27Q9BQR3 290 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 SPATA5L1Q9BVQ7 753 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 EGLN1Q9GZT9 426 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 WNT5BQ9H1J7 359 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 LRMDAQ9H2I8 198 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 PRDM13Q9H4Q3 707 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 TMEM38AQ9H6F2 299 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 SIAEQ9HAT2 523 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 SLCO1B3Q9NPD5 702 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 NANSQ9NR45 359 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 GMEB1Q9Y692 573 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 PLXNB1O43157 2135 aa11.09□□□□□ -0.63
USF1-206ENST00000491629 FAM181BA6NEQ2 426 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 CPSF4LA6NMK7 179 aaKnown RBP11.08□□□□□ -0.64
USF1-206ENST00000491629 UBDO15205 165 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 FMO6PO60774 539 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 OPN1SWP03999 348 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 F13BP05160 661 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 PCBP3P57721 371 aaKnown RBP11.08□□□□□ -0.64
USF1-206ENST00000491629 PPP1CBP62140 327 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 BTG1P62324 171 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 ERVK-25P63136 954 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 TNFAIP6P98066 277 aaPredicted RBP11.08□□□□□ -0.64
USF1-206ENST00000491629 RPL18Q07020 188 aaKnown RBP11.08□□□□□ -0.64
USF1-206ENST00000491629 RANBP3LQ86VV4 465 aaPredicted RBP11.08□□□□□ -0.64
USF1-206ENST00000491629 KRT73Q86Y46 540 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 PTOV1Q86YD1 416 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 ARMC8Q8IUR7 673 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 KLHL36Q8N4N3 616 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 SPICQ8N5J4 248 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 POU5F2Q8N7G0 328 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 ABHD4Q8TB40 342 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 ADAMTS16Q8TE57 1224 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 UPRTQ96BW1 309 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 DIRC2Q96SL1 478 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 PAIP2Q9BPZ3 127 aaKnown RBP11.08□□□□□ -0.64
USF1-206ENST00000491629 MRI1Q9BV20 369 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 THAP1Q9NVV9 213 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 ZNF229Q9UJW7 825 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 ZDHHC8Q9ULC8 765 aa11.08□□□□□ -0.64
USF1-206ENST00000491629 PRORSD1PA6NEY8 169 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 CEACAM18A8MTB9 384 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 BLOC1S5-TXNDC5H3BN57 136 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 RGS16O15492 202 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms