RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 A8MXK9 166 aa17.42■□□□□ 0.38
CLIP2-208ENST00000491075 TRAPPC2LH3BP13 241 aa17.42■□□□□ 0.38
CLIP2-208ENST00000491075 LYPD3O95274 346 aa17.42■□□□□ 0.38
CLIP2-208ENST00000491075 VIMP08670 466 aaKnown RBP17.42■□□□□ 0.38
CLIP2-208ENST00000491075 SBK2P0C263 348 aa17.42■□□□□ 0.38
CLIP2-208ENST00000491075 ZNF32P17041 273 aa17.42■□□□□ 0.38
CLIP2-208ENST00000491075 DAP3P51398 398 aaKnown RBP17.42■□□□□ 0.38
CLIP2-208ENST00000491075 NPTX1Q15818 432 aa17.42■□□□□ 0.38
CLIP2-208ENST00000491075 OCLNQ16625 522 aa17.42■□□□□ 0.38
CLIP2-208ENST00000491075 TMEM155Q4W5P6 130 aa17.42■□□□□ 0.38
CLIP2-208ENST00000491075 BLOC1S3Q6QNY0 202 aa17.42■□□□□ 0.38
CLIP2-208ENST00000491075 RFPL4BQ6ZWI9 263 aa17.42■□□□□ 0.38
CLIP2-208ENST00000491075 ASB10Q8WXI3 467 aa17.42■□□□□ 0.38
CLIP2-208ENST00000491075 MS4A7Q9GZW8 240 aaPredicted RBP17.42■□□□□ 0.38
CLIP2-208ENST00000491075 SMURF2Q9HAU4 748 aa17.42■□□□□ 0.38
CLIP2-208ENST00000491075 PATZ1Q9HBE1 687 aaKnown RBP17.42■□□□□ 0.38
CLIP2-208ENST00000491075 STX18Q9P2W9 335 aaKnown RBP17.42■□□□□ 0.38
CLIP2-208ENST00000491075 SLC7A7Q9UM01 511 aa17.42■□□□□ 0.38
CLIP2-208ENST00000491075 LOC100509620A0A075B734 347 aa17.41■□□□□ 0.38
CLIP2-208ENST00000491075 BLOC1S5-TXNDC5H3BN57 136 aa17.41■□□□□ 0.38
CLIP2-208ENST00000491075 ICMTO60725 284 aa17.41■□□□□ 0.38
CLIP2-208ENST00000491075 THY1P04216 161 aa17.41■□□□□ 0.38
CLIP2-208ENST00000491075 ACADSP16219 412 aa17.41■□□□□ 0.38
CLIP2-208ENST00000491075 SLC6A9P48067 706 aa17.41■□□□□ 0.38
CLIP2-208ENST00000491075 PCBP3P57721 371 aaKnown RBP17.41■□□□□ 0.38
CLIP2-208ENST00000491075 PPP1CBP62140 327 aa17.41■□□□□ 0.38
CLIP2-208ENST00000491075 TNFAIP6P98066 277 aaPredicted RBP17.41■□□□□ 0.38
CLIP2-208ENST00000491075 RPL18Q07020 188 aaKnown RBP17.41■□□□□ 0.38
CLIP2-208ENST00000491075 SLC9A3R2Q15599 337 aa17.41■□□□□ 0.38
CLIP2-208ENST00000491075 DUSP7Q16829 419 aa17.41■□□□□ 0.38
CLIP2-208ENST00000491075 PAGE3Q5JUK9 113 aa17.41■□□□□ 0.38
CLIP2-208ENST00000491075 CROCCP2Q86T23 111 aa17.41■□□□□ 0.38
CLIP2-208ENST00000491075 FUNDC1Q8IVP5 155 aa17.41■□□□□ 0.38
CLIP2-208ENST00000491075 ABHD4Q8TB40 342 aa17.41■□□□□ 0.38
CLIP2-208ENST00000491075 NABP1Q96AH0 204 aa17.41■□□□□ 0.38
CLIP2-208ENST00000491075 DCLRE1CQ96SD1 692 aaKnown RBP17.41■□□□□ 0.38
CLIP2-208ENST00000491075 TMEM106BQ9NUM4 274 aa17.41■□□□□ 0.38
CLIP2-208ENST00000491075 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.41■□□□□ 0.38
CLIP2-208ENST00000491075 EGFL7Q9UHF1 273 aa17.41■□□□□ 0.38
CLIP2-208ENST00000491075 KLHL21Q9UJP4 597 aa17.41■□□□□ 0.38
CLIP2-208ENST00000491075 PRKDCP78527 4128 aaKnown RBP17.4■□□□□ 0.38
CLIP2-208ENST00000491075 TRMUO75648 421 aaKnown RBP17.4■□□□□ 0.38
CLIP2-208ENST00000491075 SLC2A10O95528 541 aa17.4■□□□□ 0.38
CLIP2-208ENST00000491075 F13BP05160 661 aa17.4■□□□□ 0.38
CLIP2-208ENST00000491075 CDAP32320 146 aa17.4■□□□□ 0.38
CLIP2-208ENST00000491075 MTNR1AP48039 350 aa17.4■□□□□ 0.38
CLIP2-208ENST00000491075 UGT2B15P54855 530 aa17.4■□□□□ 0.38
CLIP2-208ENST00000491075 SPRNQ5BIV9 151 aa17.4■□□□□ 0.38
CLIP2-208ENST00000491075 LEG1Q6P5S2 330 aa17.4■□□□□ 0.38
CLIP2-208ENST00000491075 ZER1Q7Z7L7 766 aa17.4■□□□□ 0.38
CLIP2-208ENST00000491075 C11orf65Q8NCR3 313 aa17.4■□□□□ 0.38
CLIP2-208ENST00000491075 GPR32P1Q8NGA4 272 aa17.4■□□□□ 0.38
CLIP2-208ENST00000491075 AKR7LQ8NHP1 331 aa17.4■□□□□ 0.38
CLIP2-208ENST00000491075 MSL2Q9HCI7 577 aa17.4■□□□□ 0.38
CLIP2-208ENST00000491075 DCAF16Q9NXF7 216 aa17.4■□□□□ 0.38
CLIP2-208ENST00000491075 CCDC167Q9P0B6 97 aa17.4■□□□□ 0.38
CLIP2-208ENST00000491075 UGT2A1Q9Y4X1 527 aa17.4■□□□□ 0.38
CLIP2-208ENST00000491075 GMNCA6NCL1 334 aa17.39■□□□□ 0.37
CLIP2-208ENST00000491075 OPN1SWP03999 348 aa17.39■□□□□ 0.37
CLIP2-208ENST00000491075 NR2C1P13056 603 aa17.39■□□□□ 0.37
CLIP2-208ENST00000491075 MDKP21741 143 aaPredicted RBP17.39■□□□□ 0.37
CLIP2-208ENST00000491075 TNFSF4P23510 183 aa17.39■□□□□ 0.37
CLIP2-208ENST00000491075 SEC61A1P61619 476 aaKnown RBP17.39■□□□□ 0.37
CLIP2-208ENST00000491075 BTG1P62324 171 aa17.39■□□□□ 0.37
CLIP2-208ENST00000491075 PSG4Q00888 419 aa17.39■□□□□ 0.37
CLIP2-208ENST00000491075 ESCO2Q56NI9 601 aa17.39■□□□□ 0.37
CLIP2-208ENST00000491075 MTX3Q5HYI7 312 aa17.39■□□□□ 0.37
CLIP2-208ENST00000491075 EPGNQ6UW88 154 aa17.39■□□□□ 0.37
CLIP2-208ENST00000491075 C9orf139Q6ZV77 190 aa17.39■□□□□ 0.37
CLIP2-208ENST00000491075 LRRC28Q86X40 367 aaPredicted RBP17.39■□□□□ 0.37
CLIP2-208ENST00000491075 ALDH16A1Q8IZ83 802 aa17.39■□□□□ 0.37
CLIP2-208ENST00000491075 ZNF283Q8N7M2 679 aa17.39■□□□□ 0.37
CLIP2-208ENST00000491075 VANGL1Q8TAA9 524 aaPredicted RBP17.39■□□□□ 0.37
CLIP2-208ENST00000491075 CPPED1Q9BRF8 314 aaPredicted RBP17.39■□□□□ 0.37
CLIP2-208ENST00000491075 PCDHAC1Q9H158 963 aa17.39■□□□□ 0.37
CLIP2-208ENST00000491075 ELOVL3Q9HB03 270 aa17.39■□□□□ 0.37
CLIP2-208ENST00000491075 INIPQ9NRY2 104 aa17.39■□□□□ 0.37
CLIP2-208ENST00000491075 OR5V1Q9UGF6 321 aa17.39■□□□□ 0.37
CLIP2-208ENST00000491075 USH1CQ9Y6N9 552 aa17.39■□□□□ 0.37
CLIP2-208ENST00000491075 NOTCH1P46531 2555 aa17.39■□□□□ 0.37
CLIP2-208ENST00000491075 F5H0A9 414 aaPredicted RBP17.38■□□□□ 0.37
CLIP2-208ENST00000491075 POLR3GO15318 223 aaPredicted RBP17.38■□□□□ 0.37
CLIP2-208ENST00000491075 TIMM8AO60220 97 aaPredicted RBP17.38■□□□□ 0.37
CLIP2-208ENST00000491075 PPIAL4GP0DN37 164 aa17.38■□□□□ 0.37
CLIP2-208ENST00000491075 TNFRSF1AP19438 455 aa17.38■□□□□ 0.37
CLIP2-208ENST00000491075 ARHGDIAP52565 204 aa17.38■□□□□ 0.37
CLIP2-208ENST00000491075 ERVK-25P63136 954 aa17.38■□□□□ 0.37
CLIP2-208ENST00000491075 CDK5R2Q13319 367 aa17.38■□□□□ 0.37
CLIP2-208ENST00000491075 SGCAQ16586 387 aa17.38■□□□□ 0.37
CLIP2-208ENST00000491075 TSPYL5Q86VY4 417 aaPredicted RBP17.38■□□□□ 0.37
CLIP2-208ENST00000491075 PTOV1Q86YD1 416 aa17.38■□□□□ 0.37
CLIP2-208ENST00000491075 RBM45Q8IUH3 476 aaKnown RBP17.38■□□□□ 0.37
CLIP2-208ENST00000491075 PARP8Q8N3A8 854 aa17.38■□□□□ 0.37
CLIP2-208ENST00000491075 OR4D11Q8NGI4 311 aa17.38■□□□□ 0.37
CLIP2-208ENST00000491075 OR52E2Q8NGJ4 325 aa17.38■□□□□ 0.37
CLIP2-208ENST00000491075 TMIGD2Q96BF3 282 aa17.38■□□□□ 0.37
CLIP2-208ENST00000491075 MEPEQ9NQ76 525 aaPredicted RBP17.38■□□□□ 0.37
CLIP2-208ENST00000491075 IL20RAQ9UHF4 553 aa17.38■□□□□ 0.37
CLIP2-208ENST00000491075 MMP24Q9Y5R2 645 aa17.38■□□□□ 0.37
CLIP2-208ENST00000491075 M0QX08 132 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms