RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 HHATQ5VTY9 493 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 REEP3Q6NUK4 255 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 RANBP3LQ86VV4 465 aaPredicted RBP6.89□□□□□ -1.31
USP39-216ENST00000490193 LRRC28Q86X40 367 aaPredicted RBP6.89□□□□□ -1.31
USP39-216ENST00000490193 PARP8Q8N3A8 854 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 C10orf53Q8N6V4 93 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 NOXO1Q8NFA2 376 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 NFKBIDQ8NI38 313 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 SLC25A40Q8TBP6 338 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 GEMIN6Q8WXD5 167 aaKnown RBP6.89□□□□□ -1.31
USP39-216ENST00000490193 TAF15Q92804 592 aaKnown RBP eCLIP6.89□□□□□ -1.31
USP39-216ENST00000490193 MCHR2Q969V1 340 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 DACT3Q96B18 629 aaPredicted RBP6.89□□□□□ -1.31
USP39-216ENST00000490193 UPRTQ96BW1 309 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 SIGLEC11Q96RL6 698 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 WFDC6Q9BQY6 131 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 OR2J1Q9GZK6 312 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 TMEM38AQ9H6F2 299 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 SIAEQ9HAT2 523 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 NANSQ9NR45 359 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 TMEM106BQ9NUM4 274 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 DCAF16Q9NXF7 216 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 PDP1Q9P0J1 537 aaPredicted RBP6.89□□□□□ -1.31
USP39-216ENST00000490193 EGFL7Q9UHF1 273 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 LRCH1Q9Y2L9 728 aa6.89□□□□□ -1.31
USP39-216ENST00000490193 LOC100509620A0A075B734 347 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 M0QZ24 198 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 TIMM23O14925 209 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 RNF13O43567 381 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 NDUFA7O95182 113 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 LYPD3O95274 346 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 SBK2P0C263 348 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 ASAH2BP0C7U1 165 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 IGHV4-38-2P0DP08 117 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 CD80P33681 288 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 BTG1P62324 171 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 TNFAIP6P98066 277 aaPredicted RBP6.88□□□□□ -1.31
USP39-216ENST00000490193 HSF2Q03933 536 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 CDK5R2Q13319 367 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 ZMYND11Q15326 602 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 ESCO2Q56NI9 601 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 SPATA46Q5T0L3 261 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 LRIF1Q5T3J3 769 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 GCNT6Q5T4J0 391 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 FAM205BPQ63HN1 556 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 ZNF774Q6NX45 483 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 C17orf107Q6ZR85 190 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 RFPL4BQ6ZWI9 263 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 SPATC1Q76KD6 591 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 RHOUQ7L0Q8 258 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 ZNF771Q7L3S4 317 aaPredicted RBP6.88□□□□□ -1.31
USP39-216ENST00000490193 HDDC2Q7Z4H3 204 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 ZER1Q7Z7L7 766 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 MSRB3Q8IXL7 192 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 C10orf111Q8N326 155 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 GOLGA6L1Q8N7Z2 621 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 OR52E2Q8NGJ4 325 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 OR9I1Q8NGQ6 314 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 OR4F5Q8NH21 305 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 NABP1Q96AH0 204 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 NMD3Q96D46 503 aaKnown RBP6.88□□□□□ -1.31
USP39-216ENST00000490193 SAMD8Q96LT4 415 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 ZNF347Q96SE7 839 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 ZNF607Q96SK3 696 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 KRTAP4-12Q9BQ66 201 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 ZNF426Q9BUY5 554 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 SLC19A3Q9BZV2 496 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 SMURF2Q9HAU4 748 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 BEX1Q9HBH7 125 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 SLC25A37Q9NYZ2 338 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 EIF3KQ9UBQ5 218 aaKnown RBP6.88□□□□□ -1.31
USP39-216ENST00000490193 OR5V1Q9UGF6 321 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 ZNF229Q9UJW7 825 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 NBEAL2Q6ZNJ1 2754 aa6.88□□□□□ -1.31
USP39-216ENST00000490193 TRBV5-3A0A0A0MS03 114 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 C5orf49A4QMS7 147 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 NPIPB13A6NJU9 1138 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 SRRM5B3KS81 715 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 NPIPB4C9JG80 1138 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 HOXA3O43365 443 aaPredicted RBP6.87□□□□□ -1.31
USP39-216ENST00000490193 SNNO75324 88 aaPredicted RBP6.87□□□□□ -1.31
USP39-216ENST00000490193 SERPINB7O75635 380 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 CH25HO95992 272 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 NGFP01138 241 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 THY1P04216 161 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 WNT2P09544 360 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 ZNF32P17041 273 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 TNFRSF1AP19438 455 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 CCNOP22674 350 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 TUBG1P23258 451 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 PPIBP23284 216 aaKnown RBP6.87□□□□□ -1.31
USP39-216ENST00000490193 OMGP23515 440 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 MDH2P40926 338 aaKnown RBP6.87□□□□□ -1.31
USP39-216ENST00000490193 MRPL19P49406 292 aaKnown RBP6.87□□□□□ -1.31
USP39-216ENST00000490193 GDI2P50395 445 aaKnown RBP6.87□□□□□ -1.31
USP39-216ENST00000490193 RAG2P55895 527 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 CLRN1P58418 232 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 BPIFB3P59826 476 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 RPL15P61313 204 aaKnown RBP6.87□□□□□ -1.31
USP39-216ENST00000490193 PPP1CBP62140 327 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms