RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 FXYD6P3P58550 94 aa21.45■■□□□ 1.02
HMGN1-217ENST00000489072 C6orf52Q5T4I8 152 aa21.45■■□□□ 1.02
HMGN1-217ENST00000489072 C16orf89Q6UX73 402 aa21.45■■□□□ 1.02
HMGN1-217ENST00000489072 THSD4Q6ZMP0 1018 aa21.45■■□□□ 1.02
HMGN1-217ENST00000489072 OR1J2Q8NGS2 313 aa21.45■■□□□ 1.02
HMGN1-217ENST00000489072 AKR7LQ8NHP1 331 aa21.45■■□□□ 1.02
HMGN1-217ENST00000489072 NSMCE2Q96MF7 247 aa21.45■■□□□ 1.02
HMGN1-217ENST00000489072 GPA33Q99795 319 aa21.45■■□□□ 1.02
HMGN1-217ENST00000489072 GRHPRQ9UBQ7 328 aa21.45■■□□□ 1.02
HMGN1-217ENST00000489072 DUSP13Q9UII6 198 aa21.45■■□□□ 1.02
HMGN1-217ENST00000489072 ATRQ13535 2644 aa21.45■■□□□ 1.02
HMGN1-217ENST00000489072 A0A1W2PPL8 197 aa21.44■■□□□ 1.02
HMGN1-217ENST00000489072 SLC22A23A1A5C7 686 aa21.44■■□□□ 1.02
HMGN1-217ENST00000489072 NDUFB2O95178 105 aa21.44■■□□□ 1.02
HMGN1-217ENST00000489072 SCG5P05408 212 aa21.44■■□□□ 1.02
HMGN1-217ENST00000489072 APLNRP35414 380 aa21.44■■□□□ 1.02
HMGN1-217ENST00000489072 PSG4Q00888 419 aa21.44■■□□□ 1.02
HMGN1-217ENST00000489072 RGS7BPQ6MZT1 257 aaPredicted RBP21.44■■□□□ 1.02
HMGN1-217ENST00000489072 FITM2Q8N6M3 262 aa21.44■■□□□ 1.02
HMGN1-217ENST00000489072 RSRC1Q96IZ7 334 aaKnown RBP21.44■■□□□ 1.02
HMGN1-217ENST00000489072 ZNF570Q96NI8 536 aa21.44■■□□□ 1.02
HMGN1-217ENST00000489072 BPESC1Q9GZL8 116 aa21.44■■□□□ 1.02
HMGN1-217ENST00000489072 WNT5BQ9H1J7 359 aa21.44■■□□□ 1.02
HMGN1-217ENST00000489072 IL20RAQ9UHF4 553 aa21.44■■□□□ 1.02
HMGN1-217ENST00000489072 A8MV72 311 aaPredicted RBP21.43■■□□□ 1.02
HMGN1-217ENST00000489072 LYNX1G3V0Z9 82 aa21.43■■□□□ 1.02
HMGN1-217ENST00000489072 CLPTM1O96005 669 aa21.43■■□□□ 1.02
HMGN1-217ENST00000489072 CST2P09228 141 aa21.43■■□□□ 1.02
HMGN1-217ENST00000489072 LYNX1P0DP58 116 aa21.43■■□□□ 1.02
HMGN1-217ENST00000489072 ITGA2P17301 1181 aa21.43■■□□□ 1.02
HMGN1-217ENST00000489072 GIFP27352 417 aa21.43■■□□□ 1.02
HMGN1-217ENST00000489072 UCP2P55851 309 aa21.43■■□□□ 1.02
HMGN1-217ENST00000489072 MXRA7P84157 204 aa21.43■■□□□ 1.02
HMGN1-217ENST00000489072 ENDOGQ14249 297 aaKnown RBP21.43■■□□□ 1.02
HMGN1-217ENST00000489072 KRT72Q14CN4 511 aa21.43■■□□□ 1.02
HMGN1-217ENST00000489072 ZNF786Q8N393 782 aa21.43■■□□□ 1.02
HMGN1-217ENST00000489072 UBASH3BQ8TF42 649 aa21.43■■□□□ 1.02
HMGN1-217ENST00000489072 RASD2Q96D21 266 aa21.43■■□□□ 1.02
HMGN1-217ENST00000489072 POM121L2Q96KW2 1035 aa21.43■■□□□ 1.02
HMGN1-217ENST00000489072 GPX7Q96SL4 187 aaPredicted RBP21.43■■□□□ 1.02
HMGN1-217ENST00000489072 OR2H1Q9GZK4 316 aa21.43■■□□□ 1.02
HMGN1-217ENST00000489072 LRMDAQ9H2I8 198 aa21.43■■□□□ 1.02
HMGN1-217ENST00000489072 NDE1Q9NXR1 346 aa21.43■■□□□ 1.02
HMGN1-217ENST00000489072 LOC100509620A0A075B734 347 aa21.42■■□□□ 1.02
HMGN1-217ENST00000489072 TEX13CA0A0J9YWL9 993 aa21.42■■□□□ 1.02
HMGN1-217ENST00000489072 UNC119BA6NIH7 251 aa21.42■■□□□ 1.02
HMGN1-217ENST00000489072 LCKP06239 509 aa21.42■■□□□ 1.02
HMGN1-217ENST00000489072 ZNF250P15622 560 aa21.42■■□□□ 1.02
HMGN1-217ENST00000489072 STOMP27105 288 aa21.42■■□□□ 1.02
HMGN1-217ENST00000489072 SPIBQ01892 262 aa21.42■■□□□ 1.02
HMGN1-217ENST00000489072 ZNF416Q9BWM5 594 aa21.42■■□□□ 1.02
HMGN1-217ENST00000489072 NDEL1Q9GZM8 345 aa21.42■■□□□ 1.02
HMGN1-217ENST00000489072 MS4A5Q9H3V2 200 aa21.42■■□□□ 1.02
HMGN1-217ENST00000489072 NRIP3Q9NQ35 241 aa21.42■■□□□ 1.02
HMGN1-217ENST00000489072 POLE4Q9NR33 117 aa21.42■■□□□ 1.02
HMGN1-217ENST00000489072 AURKCQ9UQB9 309 aa21.42■■□□□ 1.02
HMGN1-217ENST00000489072 IGLV3-9A0A075B6K5 115 aa21.41■■□□□ 1.02
HMGN1-217ENST00000489072 A0A1W2PPW3 197 aa21.41■■□□□ 1.02
HMGN1-217ENST00000489072 PRSS37A4D1T9 235 aa21.41■■□□□ 1.02
HMGN1-217ENST00000489072 KIAA1324LA8MWY0 1029 aaPredicted RBP21.41■■□□□ 1.02
HMGN1-217ENST00000489072 XKRYO14609 159 aa21.41■■□□□ 1.02
HMGN1-217ENST00000489072 IMPA2O14732 288 aa21.41■■□□□ 1.02
HMGN1-217ENST00000489072 GADD45GO95257 159 aa21.41■■□□□ 1.02
HMGN1-217ENST00000489072 ZNF16P17020 682 aaPredicted RBP21.41■■□□□ 1.02
HMGN1-217ENST00000489072 MSR1P21757 451 aa21.41■■□□□ 1.02
HMGN1-217ENST00000489072 CCNOP22674 350 aa21.41■■□□□ 1.02
HMGN1-217ENST00000489072 WNT5AP41221 380 aa21.41■■□□□ 1.02
HMGN1-217ENST00000489072 RAD52P43351 418 aa21.41■■□□□ 1.02
HMGN1-217ENST00000489072 KRR1Q13601 381 aaKnown RBP21.41■■□□□ 1.02
HMGN1-217ENST00000489072 ALKBH6Q3KRA9 238 aa21.41■■□□□ 1.02
HMGN1-217ENST00000489072 CYB5R2Q6BCY4 276 aa21.41■■□□□ 1.02
HMGN1-217ENST00000489072 UGT2A3Q6UWM9 527 aa21.41■■□□□ 1.02
HMGN1-217ENST00000489072 ZER1Q7Z7L7 766 aa21.41■■□□□ 1.02
HMGN1-217ENST00000489072 BCL2L14Q9BZR8 327 aa21.41■■□□□ 1.02
HMGN1-217ENST00000489072 EMC7Q9NPA0 242 aa21.41■■□□□ 1.02
HMGN1-217ENST00000489072 C5orf49A4QMS7 147 aa21.4■■□□□ 1.02
HMGN1-217ENST00000489072 AHCYL1O43865 530 aa21.4■■□□□ 1.02
HMGN1-217ENST00000489072 HPXP02790 462 aa21.4■■□□□ 1.02
HMGN1-217ENST00000489072 NAT2P11245 290 aa21.4■■□□□ 1.02
HMGN1-217ENST00000489072 CTLA4P16410 223 aa21.4■■□□□ 1.02
HMGN1-217ENST00000489072 SDHAP31040 664 aa21.4■■□□□ 1.02
HMGN1-217ENST00000489072 GUCA1AP43080 201 aaPredicted RBP21.4■■□□□ 1.02
HMGN1-217ENST00000489072 SMIM11AP58511 58 aa21.4■■□□□ 1.02
HMGN1-217ENST00000489072 SPATS1Q496A3 300 aa21.4■■□□□ 1.02
HMGN1-217ENST00000489072 ELFN2Q5R3F8 820 aa21.4■■□□□ 1.02
HMGN1-217ENST00000489072 ZNF774Q6NX45 483 aa21.4■■□□□ 1.02
HMGN1-217ENST00000489072 HIPK1Q86Z02 1210 aa21.4■■□□□ 1.02
HMGN1-217ENST00000489072 ZNF101Q8IZC7 436 aa21.4■■□□□ 1.02
HMGN1-217ENST00000489072 ICA1LQ8NDH6 482 aa21.4■■□□□ 1.02
HMGN1-217ENST00000489072 ZNF540Q8NDQ6 660 aa21.4■■□□□ 1.02
HMGN1-217ENST00000489072 SYNPRQ8TBG9 265 aa21.4■■□□□ 1.02
HMGN1-217ENST00000489072 KRCC1Q9NPI7 259 aaPredicted RBP21.4■■□□□ 1.02
HMGN1-217ENST00000489072 TAAR3PQ9P1P4 343 aa21.4■■□□□ 1.02
HMGN1-217ENST00000489072 TIMM10BQ9Y5J6 103 aa21.4■■□□□ 1.02
HMGN1-217ENST00000489072 IER3IP1Q9Y5U9 82 aa21.4■■□□□ 1.02
HMGN1-217ENST00000489072 B2RBV5 119 aa21.39■■□□□ 1.01
HMGN1-217ENST00000489072 DYNC1I1O14576 645 aa21.39■■□□□ 1.01
HMGN1-217ENST00000489072 FABP3P05413 133 aa21.39■■□□□ 1.01
HMGN1-217ENST00000489072 APEHP13798 732 aaKnown RBP21.39■■□□□ 1.01
HMGN1-217ENST00000489072 ZNF23P17027 643 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms