RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 CT45A8P0DMV1 189 aa17.64■□□□□ 0.41
HMG20B-213ENST00000488973 CT45A9P0DMV2 189 aa17.64■□□□□ 0.41
HMG20B-213ENST00000488973 PGDP52209 483 aa17.64■□□□□ 0.41
HMG20B-213ENST00000488973 SRSF4Q08170 494 aaKnown RBP17.64■□□□□ 0.41
HMG20B-213ENST00000488973 ZNF345Q14585 488 aa17.64■□□□□ 0.41
HMG20B-213ENST00000488973 CT45A2Q5DJT8 189 aa17.64■□□□□ 0.41
HMG20B-213ENST00000488973 FAM109BQ6ICB4 259 aaPredicted RBP17.64■□□□□ 0.41
HMG20B-213ENST00000488973 FDX2Q6P4F2 183 aa17.64■□□□□ 0.41
HMG20B-213ENST00000488973 DPY19L4Q7Z388 723 aa17.64■□□□□ 0.41
HMG20B-213ENST00000488973 ATG4DQ86TL0 474 aaPredicted RBP17.64■□□□□ 0.41
HMG20B-213ENST00000488973 BEST3Q8N1M1 668 aa17.64■□□□□ 0.41
HMG20B-213ENST00000488973 KCNRGQ8N5I3 272 aa17.64■□□□□ 0.41
HMG20B-213ENST00000488973 WDR92Q96MX6 357 aa17.64■□□□□ 0.41
HMG20B-213ENST00000488973 ULBP3Q9BZM4 244 aa17.64■□□□□ 0.41
HMG20B-213ENST00000488973 ASAH2BP0C7U1 165 aa17.63■□□□□ 0.41
HMG20B-213ENST00000488973 KIR3DL2P43630 455 aa17.63■□□□□ 0.41
HMG20B-213ENST00000488973 MICBQ29980 383 aa17.63■□□□□ 0.41
HMG20B-213ENST00000488973 PAN3Q58A45 887 aaKnown RBP17.63■□□□□ 0.41
HMG20B-213ENST00000488973 FAM166AQ6J272 317 aa17.63■□□□□ 0.41
HMG20B-213ENST00000488973 RHOUQ7L0Q8 258 aa17.63■□□□□ 0.41
HMG20B-213ENST00000488973 BCORP1Q8N888 145 aa17.63■□□□□ 0.41
HMG20B-213ENST00000488973 TSEN15Q8WW01 171 aaKnown RBP17.63■□□□□ 0.41
HMG20B-213ENST00000488973 ZNF768Q9H5H4 540 aaKnown RBP17.63■□□□□ 0.41
HMG20B-213ENST00000488973 CHD7Q9P2D1 2997 aa17.63■□□□□ 0.41
HMG20B-213ENST00000488973 F13BP05160 661 aa17.63■□□□□ 0.41
HMG20B-213ENST00000488973 ACHEP22303 614 aa17.63■□□□□ 0.41
HMG20B-213ENST00000488973 PTAFRP25105 342 aa17.63■□□□□ 0.41
HMG20B-213ENST00000488973 MESTQ5EB52 335 aa17.63■□□□□ 0.41
HMG20B-213ENST00000488973 ARHGAP40Q5TG30 622 aa17.63■□□□□ 0.41
HMG20B-213ENST00000488973 LPCAT3Q6P1A2 487 aa17.63■□□□□ 0.41
HMG20B-213ENST00000488973 TMEM205Q6UW68 189 aa17.63■□□□□ 0.41
HMG20B-213ENST00000488973 STEAP2Q8NFT2 490 aa17.63■□□□□ 0.41
HMG20B-213ENST00000488973 INTS14Q96SY0 518 aa17.63■□□□□ 0.41
HMG20B-213ENST00000488973 PDCD10Q9BUL8 212 aa17.63■□□□□ 0.41
HMG20B-213ENST00000488973 ATG5Q9H1Y0 275 aa17.63■□□□□ 0.41
HMG20B-213ENST00000488973 STARD5Q9NSY2 213 aa17.63■□□□□ 0.41
HMG20B-213ENST00000488973 TAS2R3Q9NYW6 316 aa17.63■□□□□ 0.41
HMG20B-213ENST00000488973 A0A0J9YY10 115 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 A0A1B0GTI1 187 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 KANTRA0A1W2PQU2 76 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 OR5H14A6NHG9 310 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 OR2F2O95006 317 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 RAB3DO95716 219 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 RENP00797 406 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 PRF1P14222 555 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 OR2F1Q13607 317 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 ODF4Q2M2E3 257 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 WDR38Q5JTN6 314 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 C9orf50Q5SZB4 431 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 JMJD6Q6NYC1 403 aaPredicted RBP17.62■□□□□ 0.41
HMG20B-213ENST00000488973 OR5M8Q8NGP6 311 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 OR10H1Q9Y4A9 318 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 H3BSH0 61 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 SLC25A4P12235 298 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 HPGDP15428 266 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 CNR1P21554 472 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 HOXA6P31267 233 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.62■□□□□ 0.41
HMG20B-213ENST00000488973 KLHL26Q53HC5 615 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 OR9A4Q8NGU2 314 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 GTF3AQ92664 365 aaKnown RBP17.62■□□□□ 0.41
HMG20B-213ENST00000488973 SEH1LQ96EE3 360 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 PHYHIPLQ96FC7 376 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 TSPAN32Q96QS1 320 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 LPAR4Q99677 370 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 CCDC3Q9BQI4 270 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 GDE1Q9NZC3 331 aa17.62■□□□□ 0.41
HMG20B-213ENST00000488973 MRTO4Q9UKD2 239 aaKnown RBP17.62■□□□□ 0.41
HMG20B-213ENST00000488973 H7C1C5 153 aa17.61■□□□□ 0.41
HMG20B-213ENST00000488973 ZNF806P0C7X5 589 aa17.61■□□□□ 0.41
HMG20B-213ENST00000488973 CCKBRP32239 447 aa17.61■□□□□ 0.41
HMG20B-213ENST00000488973 NUBP1P53384 320 aa17.61■□□□□ 0.41
HMG20B-213ENST00000488973 LCN6P62502 163 aa17.61■□□□□ 0.41
HMG20B-213ENST00000488973 DEFA5Q01523 94 aa17.61■□□□□ 0.41
HMG20B-213ENST00000488973 MC2RQ01718 297 aa17.61■□□□□ 0.41
HMG20B-213ENST00000488973 RPL18Q07020 188 aaKnown RBP17.61■□□□□ 0.41
HMG20B-213ENST00000488973 NNATQ16517 81 aa17.61■□□□□ 0.41
HMG20B-213ENST00000488973 TEX30Q5JUR7 227 aa17.61■□□□□ 0.41
HMG20B-213ENST00000488973 GLT8D1Q68CQ7 371 aa17.61■□□□□ 0.41
HMG20B-213ENST00000488973 ELP5Q8TE02 316 aa17.61■□□□□ 0.41
HMG20B-213ENST00000488973 TMEM68Q96MH6 324 aa17.61■□□□□ 0.41
HMG20B-213ENST00000488973 NKX6-2Q9C056 277 aaPredicted RBP17.61■□□□□ 0.41
HMG20B-213ENST00000488973 SLCO5A1Q9H2Y9 848 aa17.61■□□□□ 0.41
HMG20B-213ENST00000488973 KCNK15Q9H427 330 aa17.61■□□□□ 0.41
HMG20B-213ENST00000488973 SFXN1Q9H9B4 322 aa17.61■□□□□ 0.41
HMG20B-213ENST00000488973 ZNF230Q9UIE0 474 aaPredicted RBP17.61■□□□□ 0.41
HMG20B-213ENST00000488973 TNFSF18Q9UNG2 199 aa17.61■□□□□ 0.41
HMG20B-213ENST00000488973 TGFBR3LH3BV60 316 aa17.61■□□□□ 0.41
HMG20B-213ENST00000488973 APBB3O95704 486 aa17.61■□□□□ 0.41
HMG20B-213ENST00000488973 KCNAB1Q14722 419 aa17.61■□□□□ 0.41
HMG20B-213ENST00000488973 TMEM185BQ9H7F4 350 aa17.61■□□□□ 0.41
HMG20B-213ENST00000488973 NIT2Q9NQR4 276 aa17.61■□□□□ 0.41
HMG20B-213ENST00000488973 BCL2L11O43521 198 aa17.6■□□□□ 0.41
HMG20B-213ENST00000488973 RFC3P40938 356 aa17.6■□□□□ 0.41
HMG20B-213ENST00000488973 GPR3P46089 330 aa17.6■□□□□ 0.41
HMG20B-213ENST00000488973 CAPZA1P52907 286 aa17.6■□□□□ 0.41
HMG20B-213ENST00000488973 EGR4Q05215 589 aa17.6■□□□□ 0.41
HMG20B-213ENST00000488973 FAM74A1Q5RGS3 127 aa17.6■□□□□ 0.41
HMG20B-213ENST00000488973 TMED4Q7Z7H5 227 aa17.6■□□□□ 0.41
HMG20B-213ENST00000488973 BPIFCQ8NFQ6 507 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms