RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 TRAM1Q15629 374 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 H3F3CQ6NXT2 135 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 GPR135Q8IZ08 494 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 C19orf47Q8N9M1 422 aaKnown RBP6.93□□□□□ -1.3
BEST3-205ENST00000488961 POMGNT2Q8NAT1 580 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 ZSCAN1Q8NBB4 408 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 CYYR1Q96J86 154 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 HSPA12BQ96MM6 686 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 PIGQQ9BRB3 760 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 MRPL37Q9BZE1 423 aaKnown RBP6.93□□□□□ -1.3
BEST3-205ENST00000488961 ZNF350Q9GZX5 532 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 RPS6KB2Q9UBS0 482 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 MED31Q9Y3C7 131 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 ADAMTS9Q9P2N4 1935 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 TMEM218A2RU14 115 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 DUXAA6NLW8 204 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 MARCH11A6NNE9 402 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 C17orf105B2RV13 164 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 TMEM150CB9EJG8 249 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 BHLHE40O14503 412 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 RNF13O43567 381 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 TBX19O60806 448 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 SMIM10L1P0DMW3 83 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 TMEM11P17152 192 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 HTR5AP47898 357 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 ANXA11P50995 505 aaKnown RBP6.93□□□□□ -1.3
BEST3-205ENST00000488961 BLOC1S1P78537 153 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 DMWDQ09019 674 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 RBM39Q14498 530 aaKnown RBP6.93□□□□□ -1.3
BEST3-205ENST00000488961 TGIF1Q15583 401 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 DECR1Q16698 335 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 B3GNTL1Q67FW5 361 aaPredicted RBP6.93□□□□□ -1.3
BEST3-205ENST00000488961 HEPHL1Q6MZM0 1159 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 MED25Q71SY5 747 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 SLC35D2Q76EJ3 337 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 MISPQ8IVT2 679 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 ACBD7Q8N6N7 88 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 TSTD1Q8NFU3 115 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 OR51Q1Q8NH59 317 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 GHSRQ92847 366 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 KISS1RQ969F8 398 aaPredicted RBP6.93□□□□□ -1.3
BEST3-205ENST00000488961 SMIM10Q96HG1 83 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 TMEM185BQ9H7F4 350 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 TMEM27Q9HBJ8 222 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 PRTFDC1Q9NRG1 225 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 DNAJB12Q9NXW2 375 aaKnown RBP6.93□□□□□ -1.3
BEST3-205ENST00000488961 PPP4R1LQ9P1A2 415 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 SIGLEC7Q9Y286 467 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 LRP4O75096 1905 aa6.93□□□□□ -1.3
BEST3-205ENST00000488961 COLCA2A8K830 154 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 KDM4EB2RXH2 506 aaPredicted RBP6.92□□□□□ -1.3
BEST3-205ENST00000488961 LDLRAD4O15165 306 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 SOX15O60248 233 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 OR8G3PP0DMU2 310 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 CT45A8P0DMV1 189 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 CT45A9P0DMV2 189 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 GSTM3P21266 225 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 IFNGR2P38484 337 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 ACAA2P42765 397 aaKnown RBP6.92□□□□□ -1.3
BEST3-205ENST00000488961 RAC1P63000 192 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 DCDP81605 110 aaKnown RBP6.92□□□□□ -1.3
BEST3-205ENST00000488961 ZNF85Q03923 595 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 MEP1BQ16820 701 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 CT45A2Q5DJT8 189 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 Q7L0L9 218 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 MEPCEQ7L2J0 689 aaKnown RBP6.92□□□□□ -1.3
BEST3-205ENST00000488961 MDGA2Q7Z553 956 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 FGD2Q7Z6J4 655 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 CDK20Q8IZL9 346 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 OR5M1Q8NGP8 315 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 OR10AC1Q8NH08 325 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 OR10J5Q8NHC4 309 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 TCTEX1D2Q8WW35 142 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 DGAT2Q96PD7 388 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 NAA11Q9BSU3 229 aaPredicted RBP6.92□□□□□ -1.3
BEST3-205ENST00000488961 OR11A1Q9GZK7 315 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 NXF5Q9H1B4 397 aaKnown RBP6.92□□□□□ -1.3
BEST3-205ENST00000488961 TLNRD1Q9H1K6 362 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 OR10A5Q9H207 317 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 TMEM231Q9H6L2 316 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 AUNIPQ9H7T9 357 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 BARX1Q9HBU1 254 aaPredicted RBP6.92□□□□□ -1.3
BEST3-205ENST00000488961 PRDM6Q9NQX0 595 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 POT1Q9NUX5 634 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 OBP2AQ9NY56 170 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 METTL1Q9UBP6 276 aaKnown RBP6.92□□□□□ -1.3
BEST3-205ENST00000488961 ZNF223Q9UK11 482 aaPredicted RBP6.92□□□□□ -1.3
BEST3-205ENST00000488961 PLEKHA6Q9Y2H5 1048 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 GSTK1Q9Y2Q3 226 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 SPACA6W5XKT8 324 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 A0A087X0M5 115 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 A0A1B0GX30 115 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 RIIAD1A6NNX1 92 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 SOX1O00570 391 aaPredicted RBP6.92□□□□□ -1.3
BEST3-205ENST00000488961 LYPD3O95274 346 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 DBIP07108 87 aaKnown RBP6.92□□□□□ -1.3
BEST3-205ENST00000488961 SNRPCP09234 159 aaKnown RBP6.92□□□□□ -1.3
BEST3-205ENST00000488961 ZNF35P13682 527 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 IL11P20809 199 aa6.92□□□□□ -1.3
BEST3-205ENST00000488961 S1PR1P21453 382 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms