RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 FAM27BQ5VT28 67 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 IGFN1Q86VF2 1251 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 ALDH16A1Q8IZ83 802 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 ARIH2OSQ8N7S6 290 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 LRRC75AQ8NAA5 344 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 SYNPRQ8TBG9 265 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 SLC7A13Q8TCU3 470 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 C11orf40Q8WZ69 217 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 DCAF13Q9NV06 445 aaKnown RBP11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 SLCO1C1Q9NYB5 712 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 GRHPRQ9UBQ7 328 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 MAGEL2Q9UJ55 1249 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 JMJD1CQ15652 2540 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.85□□□□□ -0.511e-8■■■■□ 22.6
SPTLC1-207ENST00000488921 IGLV3-9A0A075B6K5 115 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 IGKV1D-43A0A0B4J1Z2 117 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 A0A1W2PPL8 197 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 AHCYL1O43865 530 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 LMX1BO60663 402 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 MT-ND5P03915 603 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 CD14P08571 375 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 IGFBP1P08833 259 aaPredicted RBP11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 CST2P09228 141 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 TACSTD2P09758 323 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 FAM157CP0CG43 387 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 CCL2P13500 99 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 ZNF250P15622 560 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 ITGA2P17301 1181 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 FUT4P22083 530 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 ACHEP22303 614 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 STOMP27105 288 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 APEX1P27695 318 aaKnown RBP11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 UCP2P55851 309 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 BNIP1Q12981 228 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 MOGQ16653 247 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 UGT2A3Q6UWM9 527 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 FOXL2NBQ6ZUU3 175 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 LRP11Q86VZ4 500 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 MEX3DQ86XN8 651 aaKnown RBP11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 C1orf174Q8IYL3 243 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 PAQR4Q8N4S7 273 aaPredicted RBP11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 HPS1Q92902 700 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 ZNF570Q96NI8 536 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 WACQ9BTA9 647 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 BEX2Q9BXY8 128 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 SHARPINQ9H0F6 387 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 OR51B6Q9H340 312 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 GORASP2Q9H8Y8 452 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 CHODLQ9H9P2 273 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 MYEF2Q9P2K5 600 aaKnown RBP11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 EIF3KQ9UBQ5 218 aaKnown RBP11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 FZR1Q9UM11 496 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 MALRD1Q5VYJ5 2156 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 CUBNO60494 3623 aa11.85□□□□□ -0.51
SPTLC1-207ENST00000488921 RTTNQ86VV8 2226 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 LOC100289279A0A1B0GTE1 492 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 CDC42EP2O14613 210 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 GYG2O15488 501 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 NDUFB2O95178 105 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 T-ENOLP0DO92 83 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 HSD17B1P14061 328 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 HNF1AP20823 631 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 MSR1P21757 451 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 CCNOP22674 350 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 LAP3P28838 519 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 GDI2P50395 445 aaKnown RBP11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 ERVK-25P63136 954 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 MRPS11P82912 194 aaKnown RBP11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 FHL1Q13642 323 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 RIN1Q13671 783 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 MAD2L1BPQ15013 274 aaPredicted RBP11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 PCGF3Q3KNV8 242 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 SAMD4BQ5PRF9 694 aaKnown RBP11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 TMEM154Q6P9G4 183 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 TBPL2Q6SJ96 375 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 SYT9Q86SS6 491 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 PGAM4Q8N0Y7 254 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 ICA1LQ8NDH6 482 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 OR1J1Q8NGS3 322 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 RDH5Q92781 318 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 MSI2Q96DH6 328 aaKnown RBP11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 FAM46AQ96IP4 442 aaKnown RBP11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 C1orf21Q9H246 121 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 NDUFAF4Q9P032 175 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 TAAR3PQ9P1P4 343 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 AURKCQ9UQB9 309 aa11.84□□□□□ -0.51
SPTLC1-207ENST00000488921 C5orf49A4QMS7 147 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 C12orf71A8MTZ7 269 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 H3BSA7 217 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 NAT2P11245 290 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 TCN1P20061 433 aaPredicted RBP11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 GCH1P30793 250 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 SDHAP31040 664 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 SMIM11AP58511 58 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 PSG4Q00888 419 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 DNAL1Q4LDG9 190 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 ELFN2Q5R3F8 820 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 GPR139Q6DWJ6 353 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 ARL9Q6T311 187 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 RINLQ6ZS11 566 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms