RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 S100A14Q9HCY8 104 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 SRA1Q9HD15 236 aaKnown RBP10.3□□□□□ -0.76
HPS4-214ENST00000485842 POLE4Q9NR33 117 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 KRT84Q9NSB2 600 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 ST6GALNAC2Q9UJ37 374 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 KLHL21Q9UJP4 597 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 OAZ3Q9UMX2 235 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 POLR1DQ9Y2S0 133 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 ATP23Q9Y6H3 246 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 RAI1Q7Z5J4 1906 aaPredicted RBP10.3□□□□□ -0.76
HPS4-214ENST00000485842 ROS1P08922 2347 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 ANKRD17O75179 2603 aaKnown RBP10.29□□□□□ -0.76
HPS4-214ENST00000485842 FAM171A2A8MVW0 826 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 GPANK1O95872 356 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 IFNGP01579 166 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 RAF1P04049 648 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 SCG5P05408 212 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 CST2P09228 141 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 ZNF14P17017 642 aaPredicted RBP10.29□□□□□ -0.76
HPS4-214ENST00000485842 ZNF32P17041 273 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 CRABP1P29762 137 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 GRK5P34947 590 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 HSF2Q03933 536 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 PLP2Q04941 152 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 KEAP1Q14145 624 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 CRMP1Q14194 572 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 ENDOGQ14249 297 aaKnown RBP10.29□□□□□ -0.76
HPS4-214ENST00000485842 GINS1Q14691 196 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 C3orf36Q3SXR2 165 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 FAM27BQ5VT28 67 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 SLC27A4Q6P1M0 643 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 UGT2A3Q6UWM9 527 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 B3GLCTQ6Y288 498 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 DPPA2Q7Z7J5 298 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 GLB1L2Q8IW92 636 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 FAM169BQ8N8A8 192 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 NPEPL1Q8NDH3 523 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 FBXW5Q969U6 566 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 ZNF416Q9BWM5 594 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 RACGAP1Q9H0H5 632 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 FBXL3Q9UKT7 428 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 B9D1Q9UPM9 204 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 SPG11Q96JI7 2443 aa10.29□□□□□ -0.76
HPS4-214ENST00000485842 IGLV1-36A0A0B4J1U3 117 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 IGHV2OR16-5A0A0B4J2B6 119 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 E7EQL1 145 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 MGRN1O60291 552 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 MPZL1O95297 269 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 HLA-DQA2P01906 255 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 MMP7P09237 267 aaPredicted RBP10.28□□□□□ -0.76
HPS4-214ENST00000485842 ZNF3P17036 446 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 IGFBP5P24593 272 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 DNASE1P24855 282 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 CALCRP30988 508 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 PYCR1P32322 319 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 CRISP1P54107 249 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 MEP1BQ16820 701 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 PABPC1L2AQ5JQF8 200 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 TMEM236Q5W0B7 351 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 ACSM5Q6NUN0 579 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 VHLLQ6RSH7 139 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 C20orf204Q6ZNR8 217 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 OR6V1Q8N148 313 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 PROKR2Q8NFJ6 384 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 AKR7LQ8NHP1 331 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 C11orf40Q8WZ69 217 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 OTULINQ96BN8 352 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 FBXO17Q96EF6 278 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 PLEKHA8Q96JA3 519 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 ZNF75AQ96N20 296 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 CCL19Q99731 98 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 CMC2Q9NRP2 79 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 CISD1Q9NZ45 108 aaKnown RBP10.28□□□□□ -0.76
HPS4-214ENST00000485842 ITGB1BP2Q9UKP3 347 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 EDARQ9UNE0 448 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 FKBP7Q9Y680 259 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 DSCAMO60469 2012 aa10.28□□□□□ -0.76
HPS4-214ENST00000485842 IQCMA0A1B0GVH7 501 aa10.27□□□□□ -0.77
HPS4-214ENST00000485842 FAM183AA6NL82 134 aa10.27□□□□□ -0.77
HPS4-214ENST00000485842 C12orf71A8MTZ7 269 aa10.27□□□□□ -0.77
HPS4-214ENST00000485842 EI24O14681 340 aa10.27□□□□□ -0.77
HPS4-214ENST00000485842 ATE1O95260 518 aa10.27□□□□□ -0.77
HPS4-214ENST00000485842 BAG2O95816 211 aa10.27□□□□□ -0.77
HPS4-214ENST00000485842 SERPINA5P05154 406 aa10.27□□□□□ -0.77
HPS4-214ENST00000485842 GYPBP06028 91 aa10.27□□□□□ -0.77
HPS4-214ENST00000485842 GAAP10253 952 aa10.27□□□□□ -0.77
HPS4-214ENST00000485842 CCL2P13500 99 aa10.27□□□□□ -0.77
HPS4-214ENST00000485842 APEX1P27695 318 aaKnown RBP10.27□□□□□ -0.77
HPS4-214ENST00000485842 PCBD1P61457 104 aa10.27□□□□□ -0.77
HPS4-214ENST00000485842 GLO1Q04760 184 aa10.27□□□□□ -0.77
HPS4-214ENST00000485842 ZNF362Q5T0B9 420 aaPredicted RBP10.27□□□□□ -0.77
HPS4-214ENST00000485842 KDM4DQ6B0I6 523 aa10.27□□□□□ -0.77
HPS4-214ENST00000485842 ZBTB46Q86UZ6 589 aa10.27□□□□□ -0.77
HPS4-214ENST00000485842 ZNF584Q8IVC4 421 aa10.27□□□□□ -0.77
HPS4-214ENST00000485842 PQLC1Q8N2U9 271 aa10.27□□□□□ -0.77
HPS4-214ENST00000485842 PARP8Q8N3A8 854 aa10.27□□□□□ -0.77
HPS4-214ENST00000485842 ZNF611Q8N823 705 aa10.27□□□□□ -0.77
HPS4-214ENST00000485842 SLC30A7Q8NEW0 376 aa10.27□□□□□ -0.77
HPS4-214ENST00000485842 OR10H5Q8NGA6 315 aa10.27□□□□□ -0.77
HPS4-214ENST00000485842 OR51L1Q8NGJ5 315 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms