RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 ASAH2BP0C7U1 165 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 CCL2P13500 99 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 HOXB6P17509 224 aaKnown RBP11.05□□□□□ -0.64
HDAC6-227ENST00000485102 LIPAP38571 399 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 MMP15P51511 669 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 ERVS71-1P61550 626 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 SLC3A1Q07837 685 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 DUSP7Q16829 419 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 ALKBH6Q3KRA9 238 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 SAMD4BQ5PRF9 694 aaKnown RBP11.05□□□□□ -0.64
HDAC6-227ENST00000485102 C10orf128Q5T292 105 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 PATL1Q86TB9 770 aaKnown RBP11.05□□□□□ -0.64
HDAC6-227ENST00000485102 TREML1Q86YW5 311 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 POU5F2Q8N7G0 328 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 CPEB3Q8NE35 698 aaKnown RBP11.05□□□□□ -0.64
HDAC6-227ENST00000485102 MCHR2Q969V1 340 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 ARHGDIGQ99819 225 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 PCDHAC1Q9H158 963 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 IKZF5Q9H5V7 419 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 KAT8Q9H7Z6 458 aaKnown RBP11.05□□□□□ -0.64
HDAC6-227ENST00000485102 RNF121Q9H920 327 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 RNF13O43567 381 aa11.04□□□□□ -0.64
HDAC6-227ENST00000485102 ICMTO60725 284 aa11.04□□□□□ -0.64
HDAC6-227ENST00000485102 CH25HO95992 272 aa11.04□□□□□ -0.64
HDAC6-227ENST00000485102 IGHG1P01857 330 aa11.04□□□□□ -0.64
HDAC6-227ENST00000485102 THY1P04216 161 aa11.04□□□□□ -0.64
HDAC6-227ENST00000485102 ZNF81P51508 661 aa11.04□□□□□ -0.64
HDAC6-227ENST00000485102 GABPB1Q06547 395 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-227ENST00000485102 ZNF718Q3SXZ3 478 aa11.04□□□□□ -0.64
HDAC6-227ENST00000485102 ENTPD8Q5MY95 495 aa11.04□□□□□ -0.64
HDAC6-227ENST00000485102 MBNL2Q5VZF2 373 aaKnown RBP11.04□□□□□ -0.64
HDAC6-227ENST00000485102 TTC33Q6PID6 262 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-227ENST00000485102 UNQ6126/PRO20091Q6UXV3 157 aa11.04□□□□□ -0.64
HDAC6-227ENST00000485102 DOK3Q7L591 496 aa11.04□□□□□ -0.64
HDAC6-227ENST00000485102 SYT14Q8NB59 555 aa11.04□□□□□ -0.64
HDAC6-227ENST00000485102 RBM15BQ8NDT2 890 aaKnown RBP11.04□□□□□ -0.64
HDAC6-227ENST00000485102 OR6T1Q8NGN1 323 aa11.04□□□□□ -0.64
HDAC6-227ENST00000485102 ADAMTS16Q8TE57 1224 aa11.04□□□□□ -0.64
HDAC6-227ENST00000485102 MARS2Q96GW9 593 aaKnown RBP11.04□□□□□ -0.64
HDAC6-227ENST00000485102 MMADHCQ9H3L0 296 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-227ENST00000485102 MUC13Q9H3R2 512 aa11.04□□□□□ -0.64
HDAC6-227ENST00000485102 ZMAT3Q9HA38 289 aaKnown RBP11.04□□□□□ -0.64
HDAC6-227ENST00000485102 SIAEQ9HAT2 523 aa11.04□□□□□ -0.64
HDAC6-227ENST00000485102 CYSLTR2Q9NS75 346 aa11.04□□□□□ -0.64
HDAC6-227ENST00000485102 CGGBP1Q9UFW8 167 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-227ENST00000485102 KLHL21Q9UJP4 597 aa11.04□□□□□ -0.64
HDAC6-227ENST00000485102 PRPF19Q9UMS4 504 aaKnown RBP11.04□□□□□ -0.64
HDAC6-227ENST00000485102 CACNG2Q9Y698 323 aa11.04□□□□□ -0.64
HDAC6-227ENST00000485102 NPIPB13A6NJU9 1138 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 FAM220BPB1ANY3 271 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 B2RBV5 119 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 NPIPB4C9JG80 1138 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 H3BSA7 217 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 M0QX08 132 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 FOXH1O75593 365 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 IGF2P01344 180 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 IGHV1-46P01743 117 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 HIST1H2ABP04908 130 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 CD55P08174 381 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 PRTN3P24158 256 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 APLNRP35414 380 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 ZNF84P51523 738 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 PSME3P61289 254 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 MRPS34P82930 218 aaKnown RBP11.03□□□□□ -0.64
HDAC6-227ENST00000485102 NPTX1Q15818 432 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 HIST3H2AQ7L7L0 130 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 HDDC2Q7Z4H3 204 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 PTOV1Q86YD1 416 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 LRRC17Q8N6Y2 441 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 SMYD1Q8NB12 490 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 OR2T12Q8NG77 320 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 GPR32P1Q8NGA4 272 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 OR1J1Q8NGS3 322 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 OR10A6Q8NH74 314 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 LZICQ8WZA0 190 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 HIST1H2ACQ93077 130 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 POM121L2Q96KW2 1035 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 DIRC2Q96SL1 478 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 GPA33Q99795 319 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 GAL3ST1Q99999 423 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 EGLN1Q9GZT9 426 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 SMURF2Q9HAU4 748 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 ABCD2Q9UBJ2 740 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 PCDHGB1Q9Y5G3 927 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 TANC2Q9HCD6 1990 aa11.03□□□□□ -0.64
HDAC6-227ENST00000485102 TGP01266 2768 aa11.02□□□□□ -0.64
HDAC6-227ENST00000485102 ELOVL7A1L3X0 281 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 TRAPPC13A5PLN9 417 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 M0R3H8 397 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 GSTA4O15217 222 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 TPD52L2O43399 206 aaKnown RBP11.02□□□□□ -0.65
HDAC6-227ENST00000485102 TSPAN19P0C672 248 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 STOMP27105 288 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 AQP1P29972 269 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 PCGF2P35227 344 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 CLRN1P58418 232 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 MTPNP58546 118 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 CBX1P83916 185 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 MELKQ14680 651 aa11.02□□□□□ -0.65
HDAC6-227ENST00000485102 TSTQ16762 297 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms