RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 ITLN1Q8WWA0 313 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 RAB40AQ8WXH6 277 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 ZBTB18Q99592 522 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 TMEM43Q9BTV4 400 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 PNPOQ9NVS9 261 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 SELENONQ9NZV5 590 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 EIF3KQ9UBQ5 218 aaKnown RBP9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 CGGBP1Q9UFW8 167 aaPredicted RBP9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 UGT2A1Q9Y4X1 527 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 DNAH3Q8TD57 4116 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 KIR2DS1A0A191URI9 304 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 C3orf80F5H4A9 247 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 TMEM178BH3BS89 294 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 RNF13O43567 381 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 TIMM8AO60220 97 aaPredicted RBP9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 GPR137BO60478 399 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 CH25HO95992 272 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 BMP2P12643 396 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 ETS2P15036 469 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 RPS2P15880 293 aaKnown RBP9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 GDI2P50395 445 aaKnown RBP9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 ZNF84P51523 738 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 RGS8P57771 180 aaPredicted RBP9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 CLRN1P58418 232 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 FGF12P61328 243 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 NCALDP61601 193 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 PSG4Q00888 419 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 PSG7Q13046 419 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 ZNF74Q16587 644 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 ZMAT1Q5H9K5 638 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 MTX3Q5HYI7 312 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 KPRPQ5T749 579 aaPredicted RBP9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 DHRS4L2Q6PKH6 230 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 LINC00114Q6XXX2 140 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 KLBQ86Z14 1044 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 C10orf111Q8N326 155 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 TMEM86BQ8N661 226 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 OR2Z1Q8NG97 314 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 NFKBIDQ8NI38 313 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 NABP1Q96AH0 204 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 SAMD8Q96LT4 415 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 SLC30A2Q9BRI3 323 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 MRPL13Q9BYD1 178 aaKnown RBP9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 SLC19A3Q9BZV2 496 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 POFUT1Q9H488 388 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 WDR55Q9H6Y2 383 aaPredicted RBP9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 TMEM27Q9HBJ8 222 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 TMEM165Q9HC07 324 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 CCNB1IP1Q9NPC3 277 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 NOX4Q9NPH5 578 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 THUMPD1Q9NXG2 353 aaKnown RBP9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 LGALS13Q9UHV8 139 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 PPP1R3CQ9UQK1 317 aa9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.07□□□□□ -0.96
SMARCC1-205ENST00000483847 C5orf58C9J3I9 102 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 ICMTO60725 284 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 ERLIN1O75477 346 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 SLC2A10O95528 541 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 IGHG1P01857 330 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 IL6P05231 212 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 TNFRSF1AP19438 455 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 EPHA3P29320 983 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 SLC1A6P48664 564 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 MMP16P51512 607 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 GNB2P62879 340 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 ERVK-25P63136 954 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 MRPS34P82930 218 aaKnown RBP9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 FAM189A2Q15884 450 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 RUNDC3AQ59EK9 446 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 C6orf10Q5SRN2 563 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 SAMD5Q5TGI4 173 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 C1orf174Q8IYL3 243 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 MUC20Q8N307 709 aaPredicted RBP9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 FITM2Q8N6M3 262 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 NOXO1Q8NFA2 376 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 THOC1Q96FV9 657 aaKnown RBP9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 ITCHQ96J02 903 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 SEPHS2Q99611 448 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 NUDT16L1Q9BRJ7 211 aaKnown RBP9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 CDADC1Q9BWV3 514 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 WNT5BQ9H1J7 359 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 SIAEQ9HAT2 523 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 HAO1Q9UJM8 370 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 POMT1Q9Y6A1 747 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 DOCK11Q5JSL3 2073 aa9.06□□□□□ -0.96
SMARCC1-205ENST00000483847 IGKV1D-43A0A0B4J1Z2 117 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 H3BSA7 217 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 CLIC1O00299 241 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 KPNA4O00629 521 aaPredicted RBP9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 SLC22A3O75751 556 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 LYPD3O95274 346 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 CYB5R3P00387 301 aaPredicted RBP9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 IGHV4-59P01825 116 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 THY1P04216 161 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 SFTPBP07988 381 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 HOXB9P17482 250 aaPredicted RBP9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 BGNP21810 368 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 ERFP50548 548 aa9.05□□□□□ -0.96
SMARCC1-205ENST00000483847 FMODQ06828 376 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms