RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 ELMOD3Q96FG2 381 aa11.78□□□□□ -0.52
VARS-226ENST00000483275 MARS2Q96GW9 593 aaKnown RBP11.78□□□□□ -0.52
VARS-226ENST00000483275 TIMD4Q96H15 378 aa11.78□□□□□ -0.52
VARS-226ENST00000483275 POM121L2Q96KW2 1035 aa11.78□□□□□ -0.52
VARS-226ENST00000483275 DCLRE1CQ96SD1 692 aaKnown RBP11.78□□□□□ -0.52
VARS-226ENST00000483275 CGREF1Q99674 301 aa11.78□□□□□ -0.52
VARS-226ENST00000483275 SIKE1Q9BRV8 207 aa11.78□□□□□ -0.52
VARS-226ENST00000483275 LRMDAQ9H2I8 198 aa11.78□□□□□ -0.52
VARS-226ENST00000483275 POFUT1Q9H488 388 aa11.78□□□□□ -0.52
VARS-226ENST00000483275 NANOGQ9H9S0 305 aa11.78□□□□□ -0.52
VARS-226ENST00000483275 LEF1Q9UJU2 399 aaPredicted RBP11.78□□□□□ -0.52
VARS-226ENST00000483275 VWFP04275 2813 aa11.77□□□□□ -0.53
VARS-226ENST00000483275 EDF1O60869 148 aaKnown RBP11.77□□□□□ -0.53
VARS-226ENST00000483275 UBOX5O94941 541 aa11.77□□□□□ -0.53
VARS-226ENST00000483275 NGFP01138 241 aa11.77□□□□□ -0.53
VARS-226ENST00000483275 MT-ND5P03915 603 aa11.77□□□□□ -0.53
VARS-226ENST00000483275 GCH1P30793 250 aa11.77□□□□□ -0.53
VARS-226ENST00000483275 ATP4BP51164 291 aa11.77□□□□□ -0.53
VARS-226ENST00000483275 SEC61A1P61619 476 aaKnown RBP11.77□□□□□ -0.53
VARS-226ENST00000483275 PSG4Q00888 419 aa11.77□□□□□ -0.53
VARS-226ENST00000483275 NFYCQ13952 458 aa11.77□□□□□ -0.53
VARS-226ENST00000483275 ARMC4Q5T2S8 1044 aa11.77□□□□□ -0.53
VARS-226ENST00000483275 IGFN1Q86VF2 1251 aa11.77□□□□□ -0.53
VARS-226ENST00000483275 BCL6BQ8N143 479 aaPredicted RBP11.77□□□□□ -0.53
VARS-226ENST00000483275 OR10A6Q8NH74 314 aa11.77□□□□□ -0.53
VARS-226ENST00000483275 KLF14Q8TD94 323 aaPredicted RBP11.77□□□□□ -0.53
VARS-226ENST00000483275 SLC26A7Q8TE54 656 aa11.77□□□□□ -0.53
VARS-226ENST00000483275 MPP4Q96JB8 637 aa11.77□□□□□ -0.53
VARS-226ENST00000483275 JMJD8Q96S16 334 aa11.77□□□□□ -0.53
VARS-226ENST00000483275 SEPHS2Q99611 448 aa11.77□□□□□ -0.53
VARS-226ENST00000483275 WNT5BQ9H1J7 359 aa11.77□□□□□ -0.53
VARS-226ENST00000483275 EVA1AQ9H8M9 152 aa11.77□□□□□ -0.53
VARS-226ENST00000483275 NPHS2Q9NP85 383 aa11.77□□□□□ -0.53
VARS-226ENST00000483275 MMP26Q9NRE1 261 aa11.77□□□□□ -0.53
VARS-226ENST00000483275 INIPQ9NRY2 104 aa11.77□□□□□ -0.53
VARS-226ENST00000483275 SH3GLB1Q9Y371 365 aa11.77□□□□□ -0.53
VARS-226ENST00000483275 NOTCH1P46531 2555 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 PLSCR5A0PG75 271 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 DNAJC9-AS1A6NH13 148 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 J3QLI3 93 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 ANGPT2O15123 496 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 TMPRSS2O15393 492 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 PTHP01270 115 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 TROVE2P10155 538 aaKnown RBP eCLIP11.76□□□□□ -0.53
VARS-226ENST00000483275 FUT4P22083 530 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 LIMS1P48059 325 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 GDI2P50395 445 aaKnown RBP11.76□□□□□ -0.53
VARS-226ENST00000483275 DAP3P51398 398 aaKnown RBP11.76□□□□□ -0.53
VARS-226ENST00000483275 TAS2R41P59536 307 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 PPP1CBP62140 327 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 MRPS34P82930 218 aaKnown RBP11.76□□□□□ -0.53
VARS-226ENST00000483275 LAPTM4AQ15012 233 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 ZNF718Q3SXZ3 478 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 C10orf128Q5T292 105 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 OTPQ5XKR4 325 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 ZNF774Q6NX45 483 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 DPPA2Q7Z7J5 298 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 PATL1Q86TB9 770 aaKnown RBP11.76□□□□□ -0.53
VARS-226ENST00000483275 MICU2Q8IYU8 434 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 DVL3Q92997 716 aaPredicted RBP11.76□□□□□ -0.53
VARS-226ENST00000483275 NMD3Q96D46 503 aaKnown RBP11.76□□□□□ -0.53
VARS-226ENST00000483275 SGTBQ96EQ0 304 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 C1orf147Q96MC9 270 aaPredicted RBP11.76□□□□□ -0.53
VARS-226ENST00000483275 SLC19A3Q9BZV2 496 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 PCDHAC1Q9H158 963 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 KAT8Q9H7Z6 458 aaKnown RBP11.76□□□□□ -0.53
VARS-226ENST00000483275 SIAEQ9HAT2 523 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 ZNF69Q9UC07 566 aa11.76□□□□□ -0.53
VARS-226ENST00000483275 SOX21Q9Y651 276 aaPredicted RBP11.76□□□□□ -0.53
VARS-226ENST00000483275 IGHV3OR16-10A0A075B7F0 116 aa11.75□□□□□ -0.53
VARS-226ENST00000483275 A0A0G2JND7 137 aa11.75□□□□□ -0.53
VARS-226ENST00000483275 A0A1W2PPL8 197 aa11.75□□□□□ -0.53
VARS-226ENST00000483275 H7C1C5 153 aa11.75□□□□□ -0.53
VARS-226ENST00000483275 MT-ND1P03886 318 aa11.75□□□□□ -0.53
VARS-226ENST00000483275 VIMP08670 466 aaKnown RBP11.75□□□□□ -0.53
VARS-226ENST00000483275 SBK2P0C263 348 aa11.75□□□□□ -0.53
VARS-226ENST00000483275 LAP3P28838 519 aa11.75□□□□□ -0.53
VARS-226ENST00000483275 OR1E2P47887 323 aa11.75□□□□□ -0.53
VARS-226ENST00000483275 GZMMP51124 257 aa11.75□□□□□ -0.53
VARS-226ENST00000483275 LCN6P62502 163 aa11.75□□□□□ -0.53
VARS-226ENST00000483275 PIN1Q13526 163 aaPredicted RBP11.75□□□□□ -0.53
VARS-226ENST00000483275 MMEL1Q495T6 779 aa11.75□□□□□ -0.53
VARS-226ENST00000483275 ARMCX4Q5H9R4 360 aa11.75□□□□□ -0.53
VARS-226ENST00000483275 RABL3Q5HYI8 236 aa11.75□□□□□ -0.53
VARS-226ENST00000483275 FAM209AQ5JX71 171 aa11.75□□□□□ -0.53
VARS-226ENST00000483275 DPP10Q8N608 796 aa11.75□□□□□ -0.53
VARS-226ENST00000483275 TEX29Q8N6K0 151 aa11.75□□□□□ -0.53
VARS-226ENST00000483275 DEFB108BQ8NET1 73 aa11.75□□□□□ -0.53
VARS-226ENST00000483275 OR2H1Q9GZK4 316 aa11.75□□□□□ -0.53
VARS-226ENST00000483275 KCNN2Q9H2S1 579 aa11.75□□□□□ -0.53
VARS-226ENST00000483275 RABEP2Q9H5N1 569 aa11.75□□□□□ -0.53
VARS-226ENST00000483275 DDX28Q9NUL7 540 aaKnown RBP11.75□□□□□ -0.53
VARS-226ENST00000483275 EIF3KQ9UBQ5 218 aaKnown RBP11.75□□□□□ -0.53
VARS-226ENST00000483275 NDUFAF1Q9Y375 327 aa11.75□□□□□ -0.53
VARS-226ENST00000483275 TRAPPC2LH3BP13 241 aa11.74□□□□□ -0.53
VARS-226ENST00000483275 TIMM8AO60220 97 aaPredicted RBP11.74□□□□□ -0.53
VARS-226ENST00000483275 IGHV2-70P01814 119 aa11.74□□□□□ -0.53
VARS-226ENST00000483275 ERFP50548 548 aa11.74□□□□□ -0.53
VARS-226ENST00000483275 ZNF133P52736 654 aaPredicted RBP11.74□□□□□ -0.53
VARS-226ENST00000483275 TNFAIP6P98066 277 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms