RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 FKRPQ9H9S5 495 aa6.94□□□□□ -1.3
SNX13-208ENST00000482558 TBC1D17Q9HA65 648 aa6.94□□□□□ -1.3
SNX13-208ENST00000482558 ADGRL4Q9HBW9 690 aa6.94□□□□□ -1.3
SNX13-208ENST00000482558 ABCB9Q9NP78 766 aa6.94□□□□□ -1.3
SNX13-208ENST00000482558 NANSQ9NR45 359 aa6.94□□□□□ -1.3
SNX13-208ENST00000482558 GLRX2Q9NS18 164 aa6.94□□□□□ -1.3
SNX13-208ENST00000482558 CENPMQ9NSP4 180 aa6.94□□□□□ -1.3
SNX13-208ENST00000482558 ING3Q9NXR8 418 aa6.94□□□□□ -1.3
SNX13-208ENST00000482558 QPCTLQ9NXS2 382 aa6.94□□□□□ -1.3
SNX13-208ENST00000482558 ABRACLQ9P1F3 81 aa6.94□□□□□ -1.3
SNX13-208ENST00000482558 TEKT2Q9UIF3 430 aa6.94□□□□□ -1.3
SNX13-208ENST00000482558 STRAPQ9Y3F4 350 aaKnown RBP6.94□□□□□ -1.3
SNX13-208ENST00000482558 TMEM14AQ9Y6G1 99 aa6.94□□□□□ -1.3
SNX13-208ENST00000482558 RNF215Q9Y6U7 377 aa6.94□□□□□ -1.3
SNX13-208ENST00000482558 BRWD1Q9NSI6 2320 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 FAM183AA6NL82 134 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 H3BMH7 237 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 NKX2-8O15522 239 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 LRRTM2O43300 516 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 SPRY1O43609 319 aaPredicted RBP6.93□□□□□ -1.3
SNX13-208ENST00000482558 CYTIPO60759 359 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 GLCEO94923 617 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 AGFG2O95081 481 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 UTS2O95399 124 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 TGFAP01135 160 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 CLPSP04118 112 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 ANKRD34CP0C6C1 535 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 SLC2A2P11168 524 aaPredicted RBP6.93□□□□□ -1.3
SNX13-208ENST00000482558 NAGAP17050 411 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 GTF2E2P29084 291 aaKnown RBP6.93□□□□□ -1.3
SNX13-208ENST00000482558 RBMS1P29558 406 aaKnown RBP6.93□□□□□ -1.3
SNX13-208ENST00000482558 NR4A2P43354 598 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 INPP1P49441 399 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 TMED10P49755 219 aaKnown RBP6.93□□□□□ -1.3
SNX13-208ENST00000482558 EIF2B2P49770 351 aaKnown RBP6.93□□□□□ -1.3
SNX13-208ENST00000482558 GFERP55789 205 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 PITPNAQ00169 270 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 MAT1AQ00266 395 aaKnown RBP6.93□□□□□ -1.3
SNX13-208ENST00000482558 MXD1Q05195 221 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 SKP2Q13309 424 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 MFSD13AQ14CX5 517 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 ZNF74Q16587 644 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 DEFB133Q30KQ1 61 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 ZNF791Q3KP31 576 aaPredicted RBP6.93□□□□□ -1.3
SNX13-208ENST00000482558 CDONQ4KMG0 1287 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 PYDC2Q56P42 97 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 ARHGAP40Q5TG30 622 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 AGAP6Q5VW22 663 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 DMKNQ6E0U4 476 aaPredicted RBP6.93□□□□□ -1.3
SNX13-208ENST00000482558 CLEC9AQ6UXN8 241 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 GDPD3Q7L5L3 318 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 MEX3DQ86XN8 651 aaKnown RBP6.93□□□□□ -1.3
SNX13-208ENST00000482558 SFTPA2Q8IWL1 248 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 SYT14Q8NB59 555 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 FAM83FQ8NEG4 500 aaPredicted RBP6.93□□□□□ -1.3
SNX13-208ENST00000482558 OR4N2Q8NGD1 307 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 OR52E2Q8NGJ4 325 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 OR52M1Q8NGK5 317 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 OR5M3Q8NGP4 307 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 OR4C3Q8NH37 302 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 BCL2L2Q92843 193 aaPredicted RBP6.93□□□□□ -1.3
SNX13-208ENST00000482558 DVL3Q92997 716 aaPredicted RBP6.93□□□□□ -1.3
SNX13-208ENST00000482558 SMIM19Q96E16 107 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 ARSGQ96EG1 525 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 ELMOD3Q96FG2 381 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 C5orf30Q96GV9 206 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 ZC3HAV1LQ96H79 300 aaKnown RBP6.93□□□□□ -1.3
SNX13-208ENST00000482558 AGAP4Q96P64 663 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 SDHCQ99643 169 aaPredicted RBP6.93□□□□□ -1.3
SNX13-208ENST00000482558 ATF6BQ99941 703 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 HDHD5Q9BXW7 423 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 NMNAT2Q9BZQ4 307 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 PRO3102Q9H379 93 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 PLK3Q9H4B4 646 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 ZNF768Q9H5H4 540 aaKnown RBP6.93□□□□□ -1.3
SNX13-208ENST00000482558 PNO1Q9NRX1 252 aaKnown RBP6.93□□□□□ -1.3
SNX13-208ENST00000482558 IL20RAQ9UHF4 553 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 IER3IP1Q9Y5U9 82 aa6.93□□□□□ -1.3
SNX13-208ENST00000482558 TRAV36DV7A0A075B6V5 113 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 CENPBD1B2RD01 187 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 E9PLN8 166 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 J3QLW9 94 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 OR2T1O43869 369 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 CDC123O75794 336 aaPredicted RBP6.92□□□□□ -1.3
SNX13-208ENST00000482558 SC5DO75845 299 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 PTBP3O95758 552 aaKnown RBP6.92□□□□□ -1.3
SNX13-208ENST00000482558 RENP00797 406 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 KRT8P05787 483 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 ASAH2BP0C7U1 165 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 GP1BBP13224 206 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 HIST1H1CP16403 213 aaKnown RBP6.92□□□□□ -1.3
SNX13-208ENST00000482558 ZNF19P17023 458 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 CXCR1P25024 350 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 DHPSP49366 369 aaPredicted RBP6.92□□□□□ -1.3
SNX13-208ENST00000482558 RRADP55042 308 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 RAB25P57735 213 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 OR2B6P58173 313 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 LOXL3P58215 753 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 SIRPAP78324 504 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms