RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 RFXANKO14593 260 aa12.47□□□□□ -0.41
HDAC6-224ENST00000481929 TNFRSF13BO14836 293 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-224ENST00000481929 SURF4O15260 269 aa12.47□□□□□ -0.41
HDAC6-224ENST00000481929 MGRN1O60291 552 aa12.47□□□□□ -0.41
HDAC6-224ENST00000481929 MT-ATP6P00846 226 aa12.47□□□□□ -0.41
HDAC6-224ENST00000481929 PGA4P0DJD7 388 aa12.47□□□□□ -0.41
HDAC6-224ENST00000481929 PGA3P0DJD8 388 aa12.47□□□□□ -0.41
HDAC6-224ENST00000481929 MNS1Q8NEH6 495 aa12.47□□□□□ -0.41
HDAC6-224ENST00000481929 OR2Z1Q8NG97 314 aa12.47□□□□□ -0.41
HDAC6-224ENST00000481929 EPS8L3Q8TE67 593 aaKnown RBP12.47□□□□□ -0.41
HDAC6-224ENST00000481929 ITLN1Q8WWA0 313 aa12.47□□□□□ -0.41
HDAC6-224ENST00000481929 NEIL1Q96FI4 390 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-224ENST00000481929 RASSF4Q9H2L5 321 aa12.47□□□□□ -0.41
HDAC6-224ENST00000481929 LOC100509620A0A075B734 347 aa12.46□□□□□ -0.41
HDAC6-224ENST00000481929 IGHG1P01857 330 aa12.46□□□□□ -0.41
HDAC6-224ENST00000481929 LBPP18428 481 aa12.46□□□□□ -0.41
HDAC6-224ENST00000481929 CLRN1P58418 232 aa12.46□□□□□ -0.41
HDAC6-224ENST00000481929 UFM1P61960 85 aa12.46□□□□□ -0.41
HDAC6-224ENST00000481929 BST1Q10588 318 aa12.46□□□□□ -0.41
HDAC6-224ENST00000481929 CEP85LQ5SZL2 805 aa12.46□□□□□ -0.41
HDAC6-224ENST00000481929 SLC27A4Q6P1M0 643 aa12.46□□□□□ -0.41
HDAC6-224ENST00000481929 Q6ZSV7 163 aa12.46□□□□□ -0.41
HDAC6-224ENST00000481929 NLRC3Q7RTR2 1065 aa12.46□□□□□ -0.41
HDAC6-224ENST00000481929 IFT20Q8IY31 132 aa12.46□□□□□ -0.41
HDAC6-224ENST00000481929 C17orf53Q8N3J3 647 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-224ENST00000481929 FITM2Q8N6M3 262 aa12.46□□□□□ -0.41
HDAC6-224ENST00000481929 ZSCAN4Q8NAM6 433 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-224ENST00000481929 OR8B3Q8NGG8 313 aa12.46□□□□□ -0.41
HDAC6-224ENST00000481929 VANGL1Q8TAA9 524 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-224ENST00000481929 BBS10Q8TAM1 723 aa12.46□□□□□ -0.41
HDAC6-224ENST00000481929 OR8B2Q96RD0 313 aa12.46□□□□□ -0.41
HDAC6-224ENST00000481929 TMEM43Q9BTV4 400 aa12.46□□□□□ -0.41
HDAC6-224ENST00000481929 C16orf95Q9H693 158 aa12.46□□□□□ -0.41
HDAC6-224ENST00000481929 TMEM27Q9HBJ8 222 aa12.46□□□□□ -0.41
HDAC6-224ENST00000481929 IL19Q9UHD0 177 aa12.46□□□□□ -0.41
HDAC6-224ENST00000481929 A0A0B4J2E0 115 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 A0A1B0GX12 115 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 IFNL4K9M1U5 179 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 RNF13O43567 381 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 ANP32DO95626 131 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 IGHV4-59P01825 116 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 ZNF32P17041 273 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 IL12AP29459 219 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 PRKAR1BP31321 381 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 PITPNBP48739 271 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 MMP16P51512 607 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 ARHGDIAP52565 204 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 PCBP3P57721 371 aaKnown RBP12.45□□□□□ -0.42
HDAC6-224ENST00000481929 TAF11Q15544 211 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 GDPGP1Q6ZNW5 385 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 ZNF781Q8N8C0 355 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 AKR7LQ8NHP1 331 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 GATAD2BQ8WXI9 593 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 MCHR2Q969V1 340 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 ZBTB18Q99592 522 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 PCGF1Q9BSM1 259 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 SIAEQ9HAT2 523 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 TPT1P8Q9HAU6 139 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 ELOVL3Q9HB03 270 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 TMEM165Q9HC07 324 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 BCL2L10Q9HD36 194 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 MAN2C1Q9NTJ4 1040 aa12.45□□□□□ -0.42
HDAC6-224ENST00000481929 P2RY10O00398 339 aa12.44□□□□□ -0.42
HDAC6-224ENST00000481929 ZNF205O95201 554 aa12.44□□□□□ -0.42
HDAC6-224ENST00000481929 GSTM3P21266 225 aa12.44□□□□□ -0.42
HDAC6-224ENST00000481929 PSG7Q13046 419 aa12.44□□□□□ -0.42
HDAC6-224ENST00000481929 OR1Q1Q15612 314 aa12.44□□□□□ -0.42
HDAC6-224ENST00000481929 VASH1Q7L8A9 365 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-224ENST00000481929 PTOV1Q86YD1 416 aa12.44□□□□□ -0.42
HDAC6-224ENST00000481929 NOXO1Q8NFA2 376 aa12.44□□□□□ -0.42
HDAC6-224ENST00000481929 TCP10LQ8TDR4 215 aa12.44□□□□□ -0.42
HDAC6-224ENST00000481929 LRTOMTQ8WZ04 291 aa12.44□□□□□ -0.42
HDAC6-224ENST00000481929 MAGEB18Q96M61 343 aa12.44□□□□□ -0.42
HDAC6-224ENST00000481929 OR2V2Q96R30 315 aa12.44□□□□□ -0.42
HDAC6-224ENST00000481929 ZNF347Q96SE7 839 aa12.44□□□□□ -0.42
HDAC6-224ENST00000481929 NUF2Q9BZD4 464 aa12.44□□□□□ -0.42
HDAC6-224ENST00000481929 TRIM15Q9C019 465 aa12.44□□□□□ -0.42
HDAC6-224ENST00000481929 ACOXLQ9NUZ1 547 aa12.44□□□□□ -0.42
HDAC6-224ENST00000481929 NECAP2Q9NVZ3 263 aa12.44□□□□□ -0.42
HDAC6-224ENST00000481929 TAS2R5Q9NYW4 299 aa12.44□□□□□ -0.42
HDAC6-224ENST00000481929 CLN8Q9UBY8 286 aa12.44□□□□□ -0.42
HDAC6-224ENST00000481929 C5orf58C9J3I9 102 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 ITM2AO43736 263 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 ENSAO43768 121 aaKnown RBP12.43□□□□□ -0.42
HDAC6-224ENST00000481929 ICMTO60725 284 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 SPAG7O75391 227 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 BPGMP07738 259 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 ZCCHC18P0CG32 403 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 ETS2P15036 469 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 FUT4P22083 530 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 RGS8P57771 180 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-224ENST00000481929 MRPS34P82930 218 aaKnown RBP12.43□□□□□ -0.42
HDAC6-224ENST00000481929 EGR3Q06889 387 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 HIST3H3Q16695 136 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 SWT1Q5T5J6 900 aaKnown RBP12.43□□□□□ -0.42
HDAC6-224ENST00000481929 DHRS7BQ6IAN0 325 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-224ENST00000481929 DHRS4L2Q6PKH6 230 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 ARL9Q6T311 187 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 Q6ZR03 302 aa12.43□□□□□ -0.42
HDAC6-224ENST00000481929 Q6ZTK2 550 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms