RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 NPR2P20594 1047 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 LAP3P28838 519 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 CALCRP30988 508 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 ZNF133P52736 654 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-215ENST00000478531 MRPS34P82930 218 aaKnown RBP5.99□□□□□ -1.45
BRCA1-215ENST00000478531 NAAAQ02083 359 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 HSF2Q03933 536 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.99□□□□□ -1.45
BRCA1-215ENST00000478531 KRT80Q6KB66 452 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 TMEM53Q6P2H8 277 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 VHLLQ6RSH7 139 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 C20orf204Q6ZNR8 217 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 OR2T33Q8NG76 320 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 OR4Q3Q8NH05 313 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 BDH2Q9BUT1 245 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 NUAK2Q9H093 628 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 SIAEQ9HAT2 523 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 MOV10Q9HCE1 1003 aaKnown RBP5.99□□□□□ -1.45
BRCA1-215ENST00000478531 SRA1Q9HD15 236 aaKnown RBP5.99□□□□□ -1.45
BRCA1-215ENST00000478531 B3GNT2Q9NY97 397 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 IL20Q9NYY1 176 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 VSX1Q9NZR4 365 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-215ENST00000478531 CRNNQ9UBG3 495 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-215ENST00000478531 LAMP3Q9UQV4 416 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 COA3Q9Y2R0 106 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-215ENST00000478531 POLR1DQ9Y2S0 133 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 ARFGEF3Q5TH69 2177 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 IGHV2OR16-5A0A0B4J2B6 119 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 SAC3D1A6NKF1 404 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 FAM171A2A8MVW0 826 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 G3V2T6 193 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 DCTN6O00399 190 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 ARPC3O15145 178 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 KHDRBS3O75525 346 aaKnown RBP5.98□□□□□ -1.45
BRCA1-215ENST00000478531 MPZL1O95297 269 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 HLA-DQA2P01906 255 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 TP53P04637 393 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-215ENST00000478531 SCG5P05408 212 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 SOD3P08294 240 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 CCL2P13500 99 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 APEHP13798 732 aaKnown RBP5.98□□□□□ -1.45
BRCA1-215ENST00000478531 ANXA8P13928 327 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 ZNF14P17017 642 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-215ENST00000478531 ZNF32P17041 273 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 MSR1P21757 451 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 ART1P52961 327 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 PGGHGQ32M88 737 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 C1QTNF12Q5T7M4 302 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 DMRTA1Q5VZB9 504 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 DNM1P34Q6PK57 102 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 UGT2A3Q6UWM9 527 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 YTHDF3Q7Z739 585 aaKnown RBP5.98□□□□□ -1.45
BRCA1-215ENST00000478531 ZNF584Q8IVC4 421 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 GLB1L2Q8IW92 636 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 ICA1LQ8NDH6 482 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 OR9Q1Q8NGQ5 310 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 OR5K1Q8NHB7 308 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 AKR7LQ8NHP1 331 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 SMAP2Q8WU79 429 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-215ENST00000478531 NINJ1Q92982 152 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 OTULINQ96BN8 352 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 FBXO17Q96EF6 278 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 DUS3LQ96G46 650 aaKnown RBP5.98□□□□□ -1.45
BRCA1-215ENST00000478531 ZNF416Q9BWM5 594 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 OR51B6Q9H340 312 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 POLE4Q9NR33 117 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 PAPOLBQ9NRJ5 636 aaKnown RBP5.98□□□□□ -1.45
BRCA1-215ENST00000478531 KRT84Q9NSB2 600 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 FAIMQ9NVQ4 179 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 REV1Q9UBZ9 1251 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 OAZ3Q9UMX2 235 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 MTORP42345 2549 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 TLN2Q9Y4G6 2542 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 IQCMA0A1B0GVH7 501 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 OR6C68A6NDL8 312 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 RIIAD1A6NNX1 92 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 ANKRD65E5RJM6 399 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 E7EQL1 145 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 IDH3BO43837 385 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 AHCYL1O43865 530 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 GYPBP06028 91 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 ZNF3P17036 446 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 CCNOP22674 350 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 PAX7P23759 505 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 APEX1P27695 318 aaKnown RBP5.98□□□□□ -1.45
BRCA1-215ENST00000478531 CRABP1P29762 137 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 CDKN1AP38936 164 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 FABP6P51161 128 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 DAPP51397 102 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 GALK2Q01415 458 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 PLP2Q04941 152 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 GABPB1Q06547 395 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-215ENST00000478531 COX10Q12887 443 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 SNTB2Q13425 540 aaKnown RBP5.98□□□□□ -1.45
BRCA1-215ENST00000478531 ZSCAN26Q16670 478 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 MEP1BQ16820 701 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 C3orf36Q3SXR2 165 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 NRN1LQ496H8 165 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 PABPC1L2AQ5JQF8 200 aa5.98□□□□□ -1.45
BRCA1-215ENST00000478531 CD300LDQ6UXZ3 194 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms