RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 SLC19A3Q9BZV2 496 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 PAIP1Q9H074 479 aaKnown RBP13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 RAD21L1Q9H4I0 556 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 MARCH7Q9H992 704 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 CCNB1IP1Q9NPC3 277 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 LRCH1Q9Y2L9 728 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 CEACAM18A8MTB9 384 aa13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 H3BSA7 217 aa13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 WNT2P09544 360 aa13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 ZNF32P17041 273 aa13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 CDAP32320 146 aa13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 MDH2P40926 338 aaKnown RBP13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 GDI2P50395 445 aaKnown RBP13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 STX3Q13277 289 aa13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 HHATQ5VTY9 493 aa13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 REEP3Q6NUK4 255 aa13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 ZNF774Q6NX45 483 aa13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 RANBP3LQ86VV4 465 aaPredicted RBP13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 POU5F2Q8N7G0 328 aa13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 NOXO1Q8NFA2 376 aa13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 OR10S1Q8NGN2 331 aa13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 AKR7LQ8NHP1 331 aa13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 GTF2H4Q92759 462 aa13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 DACT3Q96B18 629 aaPredicted RBP13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 SEPHS2Q99611 448 aa13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 SSBP3Q9BWW4 388 aaPredicted RBP13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 MRPL13Q9BYD1 178 aaKnown RBP13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 CHIAQ9BZP6 476 aa13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 ROPN1BQ9BZX4 212 aaPredicted RBP13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 KCNN2Q9H2S1 579 aa13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 NANOGQ9H9S0 305 aa13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 ROPN1Q9HAT0 212 aaPredicted RBP13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 SIAEQ9HAT2 523 aa13.78□□□□□ -0.2
APOBEC3F-203ENST00000476513 NBEAL2Q6ZNJ1 2754 aa13.77□□□□□ -0.2
APOBEC3F-203ENST00000476513 IGHV2-70DA0A0C4DH43 119 aa13.77□□□□□ -0.21
APOBEC3F-203ENST00000476513 SLC22A31A6NKX4 558 aa13.77□□□□□ -0.21
APOBEC3F-203ENST00000476513 TIMM8AO60220 97 aaPredicted RBP13.77□□□□□ -0.21
APOBEC3F-203ENST00000476513 TSPAN15O95858 294 aa13.77□□□□□ -0.21
APOBEC3F-203ENST00000476513 HOXB9P17482 250 aaPredicted RBP13.77□□□□□ -0.21
APOBEC3F-203ENST00000476513 MRPS34P82930 218 aaKnown RBP13.77□□□□□ -0.21
APOBEC3F-203ENST00000476513 CDK6Q00534 326 aa13.77□□□□□ -0.21
APOBEC3F-203ENST00000476513 PSG4Q00888 419 aa13.77□□□□□ -0.21
APOBEC3F-203ENST00000476513 TAF9Q16594 264 aa13.77□□□□□ -0.21
APOBEC3F-203ENST00000476513 GCNT6Q5T4J0 391 aa13.77□□□□□ -0.21
APOBEC3F-203ENST00000476513 C1orf174Q8IYL3 243 aa13.77□□□□□ -0.21
APOBEC3F-203ENST00000476513 C10orf111Q8N326 155 aa13.77□□□□□ -0.21
APOBEC3F-203ENST00000476513 OR9I1Q8NGQ6 314 aa13.77□□□□□ -0.21
APOBEC3F-203ENST00000476513 RAB40AQ8WXH6 277 aa13.77□□□□□ -0.21
APOBEC3F-203ENST00000476513 NABP1Q96AH0 204 aa13.77□□□□□ -0.21
APOBEC3F-203ENST00000476513 SLCO1B3Q9NPD5 702 aa13.77□□□□□ -0.21
APOBEC3F-203ENST00000476513 NANSQ9NR45 359 aa13.77□□□□□ -0.21
APOBEC3F-203ENST00000476513 ZIM2Q9NZV7 527 aa13.77□□□□□ -0.21
APOBEC3F-203ENST00000476513 UGT2A1Q9Y4X1 527 aa13.77□□□□□ -0.21
APOBEC3F-203ENST00000476513 PRORSD1PA6NEY8 169 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 CHP2O43745 196 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 ICMTO60725 284 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 TNFRSF1AP19438 455 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 TNFSF4P23510 183 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 POLR2JP52435 117 aaKnown RBP13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 ZNF133P52736 654 aaPredicted RBP13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 BST1Q10588 318 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 PSG7Q13046 419 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 HLXQ14774 488 aaPredicted RBP13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 C10orf128Q5T292 105 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 FAM205BPQ63HN1 556 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 NXNQ6DKJ4 435 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 ZNF613Q6PF04 617 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 SLC2A7Q6PXP3 512 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 Q6YL49 198 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 Q6ZR03 302 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 MUC20Q8N307 709 aaPredicted RBP13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 OR2Z1Q8NG97 314 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 THOC1Q96FV9 657 aaKnown RBP13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 MCHR1Q99705 422 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 NOX4Q9NPH5 578 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 SDR39U1Q9NRG7 319 aaPredicted RBP13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 SLC25A37Q9NYZ2 338 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 ZNF229Q9UJW7 825 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 SLC13A4Q9UKG4 626 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 PPP1R3CQ9UQK1 317 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 RNF114Q9Y508 228 aa13.76□□□□□ -0.21
APOBEC3F-203ENST00000476513 TRPC5OSA6NMA1 111 aa13.75□□□□□ -0.21
APOBEC3F-203ENST00000476513 TMEM178BH3BS89 294 aa13.75□□□□□ -0.21
APOBEC3F-203ENST00000476513 HDAC3O15379 428 aa13.75□□□□□ -0.21
APOBEC3F-203ENST00000476513 TRMUO75648 421 aaKnown RBP13.75□□□□□ -0.21
APOBEC3F-203ENST00000476513 LYPD3O95274 346 aa13.75□□□□□ -0.21
APOBEC3F-203ENST00000476513 SLC2A10O95528 541 aa13.75□□□□□ -0.21
APOBEC3F-203ENST00000476513 THY1P04216 161 aa13.75□□□□□ -0.21
APOBEC3F-203ENST00000476513 HIST1H2ABP04908 130 aa13.75□□□□□ -0.21
APOBEC3F-203ENST00000476513 ASAH2BP0C7U1 165 aa13.75□□□□□ -0.21
APOBEC3F-203ENST00000476513 THRBP10828 461 aa13.75□□□□□ -0.21
APOBEC3F-203ENST00000476513 ERVK-25P63136 954 aa13.75□□□□□ -0.21
APOBEC3F-203ENST00000476513 PDCD1Q15116 288 aa13.75□□□□□ -0.21
APOBEC3F-203ENST00000476513 SGCAQ16586 387 aa13.75□□□□□ -0.21
APOBEC3F-203ENST00000476513 HIST3H2AQ7L7L0 130 aa13.75□□□□□ -0.21
APOBEC3F-203ENST00000476513 ZER1Q7Z7L7 766 aa13.75□□□□□ -0.21
APOBEC3F-203ENST00000476513 TMEM86BQ8N661 226 aa13.75□□□□□ -0.21
APOBEC3F-203ENST00000476513 ITLN1Q8WWA0 313 aa13.75□□□□□ -0.21
APOBEC3F-203ENST00000476513 ASB10Q8WXI3 467 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms