RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ZNF566Q969W8 418 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 NABP1Q96AH0 204 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 DACT3Q96B18 629 aaPredicted RBP7.83□□□□□ -1.16
VCL-204ENST00000472585 ELMOD3Q96FG2 381 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 SIGLEC11Q96RL6 698 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 EPYCQ99645 322 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 SLC30A2Q9BRI3 323 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 BCL2L14Q9BZR8 327 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 OR2J1Q9GZK6 312 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 POFUT1Q9H488 388 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 PATZ1Q9HBE1 687 aaKnown RBP7.83□□□□□ -1.16
VCL-204ENST00000472585 TMEM27Q9HBJ8 222 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 SSU72Q9NP77 194 aaKnown RBP7.83□□□□□ -1.16
VCL-204ENST00000472585 MEPEQ9NQ76 525 aaPredicted RBP7.83□□□□□ -1.16
VCL-204ENST00000472585 VAPAQ9P0L0 249 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 NPTNQ9Y639 398 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 CLPSL1A2RUU4 121 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 SLC22A31A6NKX4 558 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 F5H0A9 414 aaPredicted RBP7.82□□□□□ -1.16
VCL-204ENST00000472585 RNF13O43567 381 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 SLC2A10O95528 541 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 MT-ATP6P00846 226 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 MT-ND5P03915 603 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 CD55P08174 381 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 ZNF32P17041 273 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 CCNOP22674 350 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 STOMP27105 288 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 ZNF133P52736 654 aaPredicted RBP7.82□□□□□ -1.16
VCL-204ENST00000472585 RGS8P57771 180 aaPredicted RBP7.82□□□□□ -1.16
VCL-204ENST00000472585 PSG4Q00888 419 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 SLC3A1Q07837 685 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 HLXQ14774 488 aaPredicted RBP7.82□□□□□ -1.16
VCL-204ENST00000472585 ZMYND11Q15326 602 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 SLC36A2Q495M3 483 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 HHATQ5VTY9 493 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 MBNL2Q5VZF2 373 aaKnown RBP7.82□□□□□ -1.16
VCL-204ENST00000472585 ASPHD2Q6ICH7 369 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 REEP3Q6NUK4 255 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 RFPL4BQ6ZWI9 263 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 LRRC28Q86X40 367 aaPredicted RBP7.82□□□□□ -1.16
VCL-204ENST00000472585 SNX32Q86XE0 403 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 RBM15BQ8NDT2 890 aaKnown RBP7.82□□□□□ -1.16
VCL-204ENST00000472585 OR6T1Q8NGN1 323 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 FAM110DQ8TAY7 271 aaPredicted RBP7.82□□□□□ -1.16
VCL-204ENST00000472585 TRIM44Q96DX7 344 aaPredicted RBP7.82□□□□□ -1.16
VCL-204ENST00000472585 MCHR1Q99705 422 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 ARHGDIGQ99819 225 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 PRSS27Q9BQR3 290 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 ZNF426Q9BUY5 554 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 RMND5AQ9H871 391 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 GMEB1Q9Y692 573 aa7.82□□□□□ -1.16
VCL-204ENST00000472585 IQCMA0A1B0GVH7 501 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 C5orf49A4QMS7 147 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 TMEM247A6NEH6 219 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 A8MXK9 166 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 C5orf58C9J3I9 102 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 UBDO15205 165 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 HOXA3O43365 443 aaPredicted RBP7.81□□□□□ -1.16
VCL-204ENST00000472585 TRMUO75648 421 aaKnown RBP7.81□□□□□ -1.16
VCL-204ENST00000472585 PLATP00750 562 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 IGHMP01871 453 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 F13BP05160 661 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 SCG5P05408 212 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 THRBP10828 461 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 DRD4P21917 467 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 UGT2B15P54855 530 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 FMODQ06828 376 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 PSG7Q13046 419 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 CDK5R2Q13319 367 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 SCARB2Q14108 478 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 PDCD1Q15116 288 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 MOGQ16653 247 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 ZNF718Q3SXZ3 478 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 KRT71Q3SY84 523 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 ENTPD8Q5MY95 495 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 C10orf128Q5T292 105 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 GCNT6Q5T4J0 391 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 ZNF774Q6NX45 483 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 Q6ZPA2 131 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 C9orf139Q6ZV77 190 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 REC114Q7Z4M0 266 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 PTOV1Q86YD1 416 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 SVOPQ8N4V2 548 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 POU5F2Q8N7G0 328 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 CLDN22Q8N7P3 220 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 OR52E2Q8NGJ4 325 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 OR1J2Q8NGS2 313 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 HDAC2Q92769 488 aaKnown RBP7.81□□□□□ -1.16
VCL-204ENST00000472585 PAIP2Q9BPZ3 127 aaKnown RBP7.81□□□□□ -1.16
VCL-204ENST00000472585 WNT5BQ9H1J7 359 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 RAD21L1Q9H4I0 556 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 TMEM38AQ9H6F2 299 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 CACYBPQ9HB71 228 aaKnown RBP7.81□□□□□ -1.16
VCL-204ENST00000472585 TCF7L1Q9HCS4 588 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 KCNK9Q9NPC2 374 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 TNFRSF19Q9NS68 423 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 TMEM106BQ9NUM4 274 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 THAP1Q9NVV9 213 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 TENM3Q9P273 2699 aa7.81□□□□□ -1.16
VCL-204ENST00000472585 DOCK11Q5JSL3 2073 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms