RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 PRSS41Q7RTY9 318 aa9.06□□□□□ -0.96
NUP50-214ENST00000469163 VTCN1Q7Z7D3 282 aa9.06□□□□□ -0.96
NUP50-214ENST00000469163 C11orf42Q8N5U0 333 aa9.06□□□□□ -0.96
NUP50-214ENST00000469163 OR8J3Q8NGG0 315 aa9.06□□□□□ -0.96
NUP50-214ENST00000469163 ORAI1Q96D31 301 aa9.06□□□□□ -0.96
NUP50-214ENST00000469163 ZNF354BQ96LW1 612 aa9.06□□□□□ -0.96
NUP50-214ENST00000469163 FEVQ99581 238 aa9.06□□□□□ -0.96
NUP50-214ENST00000469163 SOSTQ9BQB4 213 aa9.06□□□□□ -0.96
NUP50-214ENST00000469163 TMPRSS13Q9BYE2 586 aa9.06□□□□□ -0.96
NUP50-214ENST00000469163 ZNF430Q9H8G1 570 aaPredicted RBP9.06□□□□□ -0.96
NUP50-214ENST00000469163 BRF2Q9HAW0 419 aa9.06□□□□□ -0.96
NUP50-214ENST00000469163 POT1Q9NUX5 634 aa9.06□□□□□ -0.96
NUP50-214ENST00000469163 WSB2Q9NYS7 404 aaPredicted RBP9.06□□□□□ -0.96
NUP50-214ENST00000469163 FOXJ2Q9P0K8 574 aa9.06□□□□□ -0.96
NUP50-214ENST00000469163 CDC14CA4D256 554 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 MMP7P09237 267 aaPredicted RBP9.05□□□□□ -0.96
NUP50-214ENST00000469163 F3P13726 295 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 RAB6AP20340 208 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 CD81P60033 236 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 ZNF616Q08AN1 781 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 ZNF674Q2M3X9 581 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 KCTD9Q7L273 389 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 TMPRSS7Q7RTY8 843 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 LRP11Q86VZ4 500 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 SLC22A18ASQ8N1D0 253 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 CORO2AQ92828 525 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 RNF2Q99496 336 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 ATF6BQ99941 703 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 FAAP24Q9BTP7 215 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 ZNF350Q9GZX5 532 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 HRH4Q9H3N8 390 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 IKZF5Q9H5V7 419 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 SLC52A3Q9NQ40 469 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 CALML5Q9NZT1 146 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 ZNF230Q9UIE0 474 aaPredicted RBP9.05□□□□□ -0.96
NUP50-214ENST00000469163 RBM7Q9Y580 266 aaKnown RBP9.05□□□□□ -0.96
NUP50-214ENST00000469163 IGHV1OR15-9A0A0B4J2B8 117 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 TRBV5-4A0A0C4DH59 114 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 HMSDA8MTL9 139 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 SLC19A2O60779 497 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 SLCO2B1O94956 709 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 PTBP3O95758 552 aaKnown RBP9.05□□□□□ -0.96
NUP50-214ENST00000469163 SCGB1D2O95969 90 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 SLC35G6P0C7Q6 338 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 MGMTP16455 207 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 SDC1P18827 310 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 GALP22466 123 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 BLKP51451 505 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 NCBP2P52298 156 aaKnown RBP eCLIP9.05□□□□□ -0.96
NUP50-214ENST00000469163 UBE2MP61081 183 aaKnown RBP9.05□□□□□ -0.96
NUP50-214ENST00000469163 VAMP2P63027 116 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 LASP1Q14847 261 aaKnown RBP9.05□□□□□ -0.96
NUP50-214ENST00000469163 TMEM52BQ4KMG9 183 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 METRNLQ641Q3 311 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 C19orf47Q8N9M1 422 aaKnown RBP9.05□□□□□ -0.96
NUP50-214ENST00000469163 OR1L6Q8NGR2 347 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 OR1J4Q8NGS1 313 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.05□□□□□ -0.96
NUP50-214ENST00000469163 DNAJC27Q9NZQ0 273 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 SLC13A4Q9UKG4 626 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 SAMD4AQ9UPU9 718 aaKnown RBP9.05□□□□□ -0.96
NUP50-214ENST00000469163 ROS1P08922 2347 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 C2orf92A0A1B0GVN3 265 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 LNP1A1A4G5 178 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 TRAPPC13A5PLN9 417 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 CNOT4O95628 575 aaKnown RBP9.05□□□□□ -0.96
NUP50-214ENST00000469163 RLN1P04808 185 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 SFTA3P0C7M3 94 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 RPL3P39023 403 aaKnown RBP9.05□□□□□ -0.96
NUP50-214ENST00000469163 SRSF11Q05519 484 aaKnown RBP9.05□□□□□ -0.96
NUP50-214ENST00000469163 FAM180AQ6UWF9 173 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 TMEM184AQ6ZMB5 413 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 CXXC5Q7LFL8 322 aaKnown RBP9.05□□□□□ -0.96
NUP50-214ENST00000469163 SLC16A14Q7RTX9 510 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 GALNTL5Q7Z4T8 443 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 ZNF546Q86UE3 836 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 KLHDC8AQ8IYD2 350 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 GATSQ8NAP1 163 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 OR5D16Q8NGK9 328 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 OR9A4Q8NGU2 314 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 OR5K2Q8NHB8 316 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 NEIL3Q8TAT5 605 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 GABARAPL1Q9H0R8 117 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 ARRDC1-AS1Q9H2J1 176 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 MAGIXQ9H6Y5 334 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 GPN1Q9HCN4 374 aaPredicted RBP9.05□□□□□ -0.96
NUP50-214ENST00000469163 CYSLTR2Q9NS75 346 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 FAM120CQ9NX05 1096 aaKnown RBP9.05□□□□□ -0.96
NUP50-214ENST00000469163 KCNG2Q9UJ96 466 aa9.05□□□□□ -0.96
NUP50-214ENST00000469163 SERTM2A0A1B0GWG4 89 aa9.04□□□□□ -0.96
NUP50-214ENST00000469163 UBE2QL1A1L167 161 aa9.04□□□□□ -0.96
NUP50-214ENST00000469163 SERTM1A2A2V5 107 aa9.04□□□□□ -0.96
NUP50-214ENST00000469163 F5H0A9 414 aaPredicted RBP9.04□□□□□ -0.96
NUP50-214ENST00000469163 SLC28A2O43868 658 aa9.04□□□□□ -0.96
NUP50-214ENST00000469163 ZNF217O75362 1048 aa9.04□□□□□ -0.96
NUP50-214ENST00000469163 RDH16O75452 317 aa9.04□□□□□ -0.96
NUP50-214ENST00000469163 ADAP00813 363 aa9.04□□□□□ -0.96
NUP50-214ENST00000469163 IGHV4-34P06331 123 aa9.04□□□□□ -0.96
NUP50-214ENST00000469163 MPGP29372 298 aa9.04□□□□□ -0.96
NUP50-214ENST00000469163 IDH3GP51553 393 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms