RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 MBTPS2O43462 519 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 ALOX12BO75342 701 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 DBIP07108 87 aaKnown RBP11.22□□□□□ -0.61
USP11-206ENST00000469080 WNT4P56705 351 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 YPEL5P62699 121 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 TSPAN31Q12999 210 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 EIPR1Q53HC9 387 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 RAB3CQ96E17 227 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 C4orf36Q96KX1 117 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 PDCD1LG2Q9BQ51 273 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 ALG8Q9BVK2 526 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 NXF5Q9H1B4 397 aaKnown RBP11.22□□□□□ -0.61
USP11-206ENST00000469080 MKKSQ9NPJ1 570 aaPredicted RBP11.22□□□□□ -0.61
USP11-206ENST00000469080 ZSCAN32Q9NX65 697 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 IGHV1OR15-9A0A0B4J2B8 117 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 PLSCR5A0PG75 271 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 TMEM72A0PK05 275 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 C9orf170A2RU37 121 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 PRICKLE3O43900 615 aaPredicted RBP11.21□□□□□ -0.61
USP11-206ENST00000469080 ERGP11308 486 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 CRABP1P29762 137 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 SEC61A1P61619 476 aaKnown RBP11.21□□□□□ -0.61
USP11-206ENST00000469080 RSU1Q15404 277 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 CDNFQ49AH0 187 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 PYY3Q5JQD4 70 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 C19orf48Q6RUI8 117 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 TMEM184AQ6ZMB5 413 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 CEACAM19Q7Z692 300 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 MARCH3Q86UD3 253 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 ZNF561Q8N587 486 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 SIRT6Q8N6T7 355 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 PROKR2Q8NFJ6 384 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 TMEM163Q8TC26 289 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 RFKQ969G6 155 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 SLC25A28Q96A46 364 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 FUZQ9BT04 418 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 PHF7Q9BWX1 381 aaPredicted RBP11.21□□□□□ -0.61
USP11-206ENST00000469080 OR10A4Q9H209 315 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 ANKRD10Q9NXR5 420 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 ZNF629Q9UEG4 869 aaPredicted RBP11.21□□□□□ -0.61
USP11-206ENST00000469080 FRYQ5TBA9 3013 aa11.21□□□□□ -0.61
USP11-206ENST00000469080 G3V3Q6 166 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 PRODHO43272 600 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 ACHEP22303 614 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 SHC1P29353 583 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 GRK6P43250 576 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 CLDN6P56747 220 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 TRA2BP62995 288 aaKnown RBP11.21□□□□□ -0.62
USP11-206ENST00000469080 SURF2Q15527 256 aaPredicted RBP11.21□□□□□ -0.62
USP11-206ENST00000469080 ZNF660Q6AZW8 331 aaPredicted RBP11.21□□□□□ -0.62
USP11-206ENST00000469080 FAM199XQ6PEV8 388 aaPredicted RBP11.21□□□□□ -0.62
USP11-206ENST00000469080 KIRREL2Q6UWL6 708 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 Q6ZTK2 550 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 FGD2Q7Z6J4 655 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 SKA3Q8IX90 412 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 DMBX1Q8NFW5 382 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 GPR119Q8TDV5 335 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 POP5Q969H6 163 aaKnown RBP11.21□□□□□ -0.62
USP11-206ENST00000469080 Q96M85 177 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 C5orf34Q96MH7 638 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 CDCA4Q9BXL8 241 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 DUSP22Q9NRW4 184 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 FGF21Q9NSA1 209 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 METTL1Q9UBP6 276 aaKnown RBP11.21□□□□□ -0.62
USP11-206ENST00000469080 DENND4AQ7Z401 1863 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 CXorf51AA0A1B0GTR3 108 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 RFPL4AA6NLU0 287 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 RFPL4AL1F8VTS6 287 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 YIF1AO95070 293 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 HOXB6P17509 224 aaKnown RBP11.21□□□□□ -0.62
USP11-206ENST00000469080 ELK1P19419 428 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 MST1P26927 711 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 SKP1P63208 163 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 GLO1Q04760 184 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 FAM189A2Q15884 450 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 DECR1Q16698 335 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 SLC35D2Q76EJ3 337 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 COMMD2Q86X83 199 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 ACBD7Q8N6N7 88 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 SAMD12Q8N8I0 201 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 OR6N2Q8NGY6 317 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 HLA-CQ95604 372 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 TLNRD1Q9H1K6 362 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 SEMA6CQ9H3T2 930 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 CUTCQ9NTM9 273 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 AK6Q9Y3D8 172 aaKnown RBP11.21□□□□□ -0.62
USP11-206ENST00000469080 GOLT1BQ9Y3E0 138 aa11.21□□□□□ -0.62
USP11-206ENST00000469080 FREM3P0C091 2139 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 SOX1O00570 391 aaPredicted RBP11.2□□□□□ -0.62
USP11-206ENST00000469080 ZNF749O43361 778 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 CRTAPO75718 401 aaPredicted RBP11.2□□□□□ -0.62
USP11-206ENST00000469080 SNRPCP09234 159 aaKnown RBP11.2□□□□□ -0.62
USP11-206ENST00000469080 SBK2P0C263 348 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 EDNRAP25101 427 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 CTXN1P60606 82 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 SAPCD1Q5SSQ6 148 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 C1QL3Q5VWW1 255 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 LEG1Q6P5S2 330 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 MISPQ8IVT2 679 aa11.2□□□□□ -0.62
USP11-206ENST00000469080 NAXEQ8NCW5 288 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms