RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 ZNF551Q7Z340 670 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-207ENST00000468925 SZRD1Q7Z422 152 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 ARHGAP12Q8IWW6 846 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 TMEM183AQ8IXX5 376 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 TMEFF1Q8IYR6 380 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 MUC20Q8N307 709 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-207ENST00000468925 KDM8Q8N371 416 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF614Q8N883 585 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 ZDHHC22Q8N966 263 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 ACOT4Q8N9L9 421 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 TMEM229BQ8NBD8 167 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 RNF149Q8NC42 400 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 TMEM104Q8NE00 496 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 CCDC54Q8NEL0 328 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 OR10AD1Q8NGE0 317 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 OR56B2PQ8NGI1 322 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 OR4A4PQ8NGN8 299 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 OR2A12Q8NGT7 310 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 OR51F2Q8NH61 342 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 DUSP19Q8WTR2 217 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 ORAOV1Q8WV07 137 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 METTL21AQ8WXB1 218 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 TNFRSF14Q92956 283 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 RSPRY1Q96DX4 576 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 KTI12Q96EK9 354 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-207ENST00000468925 MARS2Q96GW9 593 aaKnown RBP4.41□□□□□ -1.7
SF3B1-207ENST00000468925 FAM210BQ96KR6 192 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 PRRC1Q96M27 445 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 PACRGQ96M98 296 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-207ENST00000468925 C5orf34Q96MH7 638 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 TSSK3Q96PN8 268 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 FRG2BQ96QU4 278 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 JMJD8Q96S16 334 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 INTS14Q96SY0 518 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 PRRT1Q99946 306 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 SLC39A8Q9C0K1 460 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 WWTR1Q9GZV5 400 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF350Q9GZX5 532 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 RHBGQ9H310 441 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 RIMS4Q9H426 269 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-207ENST00000468925 DPEP2Q9H4A9 486 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 RERGLQ9H628 205 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 ASB8Q9H765 288 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 ZMAT4Q9H898 229 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 ZMAT3Q9HA38 289 aaKnown RBP4.41□□□□□ -1.7
SF3B1-207ENST00000468925 TRPV4Q9HBA0 871 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 ADAP2Q9NPF8 381 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 IL26Q9NPH9 171 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 MRPL17Q9NRX2 175 aaKnown RBP4.41□□□□□ -1.7
SF3B1-207ENST00000468925 GPR173Q9NS66 373 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 SLC6A13Q9NSD5 602 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 C2orf42Q9NWW7 574 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 DDIT4Q9NX09 232 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 SLC2A8Q9NY64 477 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 MARCH4Q9P2E8 410 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-207ENST00000468925 VPS29Q9UBQ0 182 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 PRODH2Q9UF12 536 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 CPA4Q9UI42 421 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 FBXW2Q9UKT8 454 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 STARD10Q9Y365 291 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 HCFC2Q9Y5Z7 792 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 DAPL1A0PJW8 107 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 TMEM150BA6NC51 233 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 IFITM5A6NNB3 132 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 HSPB2A8KAH6 182 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 LOC730098B7Z3J9 87 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 F5H5T6 163 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 PYCARD-AS1I3L0S3 204 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 M0R036 132 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 FMO6PO60774 539 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 TBX19O60806 448 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 SCGNO76038 276 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 CST4P01036 141 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 PDYNP01213 254 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 SNRNP70P08621 437 aaKnown RBP4.4□□□□□ -1.71
SF3B1-207ENST00000468925 CST2P09228 141 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 C1SP09871 688 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 ALPPL2P10696 532 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 GTF2F2P13984 249 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 IL11P20809 199 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 NT5EP21589 574 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 G0S2P27469 103 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 CD82P27701 267 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 SHC1P29353 583 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 IL2RGP31785 369 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 PPICP45877 212 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 P2RX1P51575 399 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 MVDP53602 400 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 PGGT1BP53609 377 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 CRYBA2P53672 197 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 SLC16A1P53985 500 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 TAS2R38P59533 333 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 VAMP2P63027 116 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 HMGCS1Q01581 520 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 CACNG1Q06432 222 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 PNRC1Q12796 327 aaPredicted RBP4.4□□□□□ -1.71
SF3B1-207ENST00000468925 CBFBQ13951 182 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 HSPB2Q16082 182 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 RPE65Q16518 533 aa4.4□□□□□ -1.71
SF3B1-207ENST00000468925 GUK1Q16774 197 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms