RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 PGA4P0DJD7 388 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 PGA3P0DJD8 388 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 SPNP16150 400 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 FSTP19883 344 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 TCN2P20062 427 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 IL11P20809 199 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 DPP4P27487 766 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 LAP3P28838 519 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 SRD5A2P31213 254 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 MAP2K3P46734 347 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 CAPZA1P52907 286 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 SUCLG1P53597 346 aaKnown RBP6.8□□□□□ -1.32
COL6A3-208ENST00000468792 CSNK2A1P68400 391 aaPredicted RBP6.8□□□□□ -1.32
COL6A3-208ENST00000468792 ADAM8P78325 824 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 POU3F1Q03052 451 aaPredicted RBP6.8□□□□□ -1.32
COL6A3-208ENST00000468792 P2RY14Q15391 338 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 WDR38Q5JTN6 314 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 TMEM244Q5VVB8 128 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 TCEAL6Q6IPX3 200 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 SLC25A47Q6Q0C1 308 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 ZNF704Q6ZNC4 412 aaPredicted RBP6.8□□□□□ -1.32
COL6A3-208ENST00000468792 FOXL2NBQ6ZUU3 175 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 TIPARPQ7Z3E1 657 aaKnown RBP6.8□□□□□ -1.32
COL6A3-208ENST00000468792 KRT77Q7Z794 578 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 LRRTM1Q86UE6 522 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 GHDCQ8N2G8 530 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 TMEM156Q8N614 296 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 ZNF676Q8N7Q3 588 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 OR4M1Q8NGD0 313 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 OR1J4Q8NGS1 313 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 OR13C5Q8NGS8 318 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 CT55Q8WUE5 264 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 SNRNP27Q8WVK2 155 aaKnown RBP6.8□□□□□ -1.32
COL6A3-208ENST00000468792 KCNE4Q8WWG9 221 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 HSD17B8Q92506 261 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 TCEAL3Q969E4 200 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 TRIM63Q969Q1 353 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 PIGQQ9BRB3 760 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 MARVELD1Q9BSK0 173 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 NAA11Q9BSU3 229 aaPredicted RBP6.8□□□□□ -1.32
COL6A3-208ENST00000468792 SF3B5Q9BWJ5 86 aaKnown RBP6.8□□□□□ -1.32
COL6A3-208ENST00000468792 C11orf54Q9H0W9 315 aaPredicted RBP6.8□□□□□ -1.32
COL6A3-208ENST00000468792 CCDC86Q9H6F5 360 aaKnown RBP6.8□□□□□ -1.32
COL6A3-208ENST00000468792 MOB1AQ9H8S9 216 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 PLEKHA1Q9HB21 404 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 ZNF160Q9HCG1 818 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 TCF7L1Q9HCS4 588 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 SLC17A5Q9NRA2 495 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 ANKRD10Q9NXR5 420 aa6.8□□□□□ -1.32
COL6A3-208ENST00000468792 A0A0G2JMP0 313 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 A0A0X1KG70 313 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 SMIM30A4D0T7 59 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 C9orf172C9J069 976 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 H3BML4 177 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 SULT2B1O00204 365 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 LYRM1O43325 122 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 RPP14O95059 124 aaKnown RBP6.79□□□□□ -1.32
COL6A3-208ENST00000468792 MT-CO3P00414 261 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 CD2P06729 351 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 CELA2AP08217 269 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 SPARCP09486 303 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 UBCP0CG48 685 aaKnown RBP6.79□□□□□ -1.32
COL6A3-208ENST00000468792 CCL3P10147 92 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 PSKH1P11801 424 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 ZNF43P17038 809 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 IGFBP3P17936 291 aaPredicted RBP6.79□□□□□ -1.32
COL6A3-208ENST00000468792 CSRP1P21291 193 aaKnown RBP6.79□□□□□ -1.32
COL6A3-208ENST00000468792 ACHEP22303 614 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 AZGP1P25311 298 aaKnown RBP6.79□□□□□ -1.32
COL6A3-208ENST00000468792 CTSSP25774 331 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 CD82P27701 267 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 HLA-DMAP28067 261 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 SLC6A1P30531 599 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 KIR3DL2P43630 455 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 RAG2P55895 527 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 BIDP55957 195 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 OR2B6P58173 313 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 LSM6P62312 80 aaKnown RBP6.79□□□□□ -1.32
COL6A3-208ENST00000468792 BTG1P62324 171 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 DYRK1AQ13627 763 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 EIF2B1Q14232 305 aaKnown RBP6.79□□□□□ -1.32
COL6A3-208ENST00000468792 MELKQ14680 651 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 TAB1Q15750 504 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 ETFDHQ16134 617 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 LPAL2Q16609 132 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 TMEM176BQ3YBM2 270 aaPredicted RBP6.79□□□□□ -1.32
COL6A3-208ENST00000468792 ACER2Q5QJU3 275 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 C10orf128Q5T292 105 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 TMEM225Q6GV28 225 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 FAM166AQ6J272 317 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 DNM1P46Q6ZS02 220 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 LSRQ86X29 649 aaPredicted RBP6.79□□□□□ -1.32
COL6A3-208ENST00000468792 NOXO1Q8NFA2 376 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 OR4M2Q8NGB6 313 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 TMEM106AQ96A25 262 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 PTX4Q96A99 478 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 RFT1Q96AA3 541 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 CREB3L1Q96BA8 519 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 HAVCR1Q96D42 359 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 OR5B2Q96R09 309 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms