RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 PRICKLE4Q2TBC4 344 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 NUDCD2Q8WVJ2 157 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 CCDC74AQ96AQ1 378 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 NKX6-2Q9C056 277 aaPredicted RBP13.13□□□□□ -0.31
NCL-207ENST00000461347 RGCCQ9H4X1 137 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 ZMIZ1Q9ULJ6 1067 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 LSM5Q9Y4Y9 91 aaKnown RBP13.13□□□□□ -0.31
NCL-207ENST00000461347 CDK2AP1O14519 115 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 ARPC3O15145 178 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 MPC2O95563 127 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 POU3F2P20265 443 aaPredicted RBP13.13□□□□□ -0.31
NCL-207ENST00000461347 PMPCAQ10713 525 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 SPICQ8N5J4 248 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 OR11G2Q8NGC1 345 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 OR5D14Q8NGL3 314 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 OR4K15Q8NH41 348 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 TOMM40LQ969M1 308 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 C3orf49Q96BT1 292 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 PGLYRP3Q96LB9 341 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 CLDN6P56747 220 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 PLEKHN1Q494U1 663 aaPredicted RBP13.13□□□□□ -0.31
NCL-207ENST00000461347 H3F3CQ6NXT2 135 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 PARM1Q6UWI2 310 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 TRILQ7L0X0 811 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 RASGRP3Q8IV61 690 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 OR4S1Q8NGB4 309 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 OR5T2Q8NGG2 359 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 OR5D18Q8NGL1 313 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 OR1J2Q8NGS2 313 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 OR10AC1Q8NH08 325 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 PPP1R1CQ8WVI7 109 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 LPAR4Q99677 370 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 TMEM231Q9H6L2 316 aa13.13□□□□□ -0.31
NCL-207ENST00000461347 VSX1Q9NZR4 365 aaPredicted RBP13.13□□□□□ -0.31
NCL-207ENST00000461347 TRAV36DV7A0A075B6V5 113 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 GSTZ1O43708 216 aaPredicted RBP13.12□□□□□ -0.31
NCL-207ENST00000461347 PMP2P02689 132 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 THY1P04216 161 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 ERGP11308 486 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 PEBP1P30086 187 aaKnown RBP13.12□□□□□ -0.31
NCL-207ENST00000461347 BDKRB2P30411 391 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 DCXRQ7Z4W1 244 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 TMED6Q8WW62 240 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 SPACA5Q96QH8 159 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 FBRSQ9HAH7 460 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 RHBDD3Q9Y3P4 386 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 PCDHGA9Q9Y5G4 932 aaKnown RBP13.12□□□□□ -0.31
NCL-207ENST00000461347 C2orf72A6NCS6 295 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 PRAMEF26H0Y7S4 382 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 TMEM196Q5HYL7 178 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 CORO6Q6QEF8 472 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 MRGPREQ86SM8 312 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 FBXW5Q969U6 566 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 LCORQ96JN0 433 aaPredicted RBP13.12□□□□□ -0.31
NCL-207ENST00000461347 SEMA6CQ9H3T2 930 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 FKRPQ9H9S5 495 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 TMED7-TICAM2A0A0A6YYA0 188 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 LOC107986453A0A1B0GWG9 222 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 OR5K3A6NET4 321 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 SNAPINO95295 136 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 CBX7O95931 251 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 SLC2A1P11166 492 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 TAS2R31P59538 309 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 SNRPNP63162 240 aaKnown RBP13.12□□□□□ -0.31
NCL-207ENST00000461347 TMEM65Q6PI78 240 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 OR51T1Q8NGJ9 327 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 MOGAT1Q96PD6 335 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 WDR77Q9BQA1 342 aaPredicted RBP13.12□□□□□ -0.31
NCL-207ENST00000461347 OR11A1Q9GZK7 315 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 DNTTIP1Q9H147 329 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 NXF5Q9H1B4 397 aaKnown RBP13.12□□□□□ -0.31
NCL-207ENST00000461347 SLCO5A1Q9H2Y9 848 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 PPP4R1LQ9P1A2 415 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 OPN4Q9UHM6 478 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 TMED7Q9Y3B3 224 aa13.12□□□□□ -0.31
NCL-207ENST00000461347 A0A0A6YYH2 397 aa13.11□□□□□ -0.31
NCL-207ENST00000461347 A6NJ64 397 aa13.11□□□□□ -0.31
NCL-207ENST00000461347 SFTPDP35247 375 aa13.11□□□□□ -0.31
NCL-207ENST00000461347 ZNF679Q8IYX0 411 aa13.11□□□□□ -0.31
NCL-207ENST00000461347 TMEM52Q8NDY8 209 aa13.11□□□□□ -0.31
NCL-207ENST00000461347 ZPLD1Q8TCW7 415 aa13.11□□□□□ -0.31
NCL-207ENST00000461347 ZNF707Q96C28 371 aaPredicted RBP13.11□□□□□ -0.31
NCL-207ENST00000461347 KTI12Q96EK9 354 aaPredicted RBP13.11□□□□□ -0.31
NCL-207ENST00000461347 TOE1Q96GM8 510 aaKnown RBP13.11□□□□□ -0.31
NCL-207ENST00000461347 CMTM3Q96MX0 182 aa13.11□□□□□ -0.31
NCL-207ENST00000461347 JAM3Q9BX67 310 aa13.11□□□□□ -0.31
NCL-207ENST00000461347 RPS10P5Q9NQ39 176 aa13.11□□□□□ -0.31
NCL-207ENST00000461347 OR52A1Q9UKL2 312 aa13.11□□□□□ -0.31
NCL-207ENST00000461347 KCNIP3Q9Y2W7 256 aa13.11□□□□□ -0.31
NCL-207ENST00000461347 CTDSPLO15194 276 aa13.11□□□□□ -0.31
NCL-207ENST00000461347 AKR7A3O95154 331 aa13.11□□□□□ -0.31
NCL-207ENST00000461347 GABRA1P14867 456 aa13.11□□□□□ -0.31
NCL-207ENST00000461347 CXCL2P19875 107 aa13.11□□□□□ -0.31
NCL-207ENST00000461347 NPY4RP50391 375 aa13.11□□□□□ -0.31
NCL-207ENST00000461347 DEFB133Q30KQ1 61 aa13.11□□□□□ -0.31
NCL-207ENST00000461347 WDR38Q5JTN6 314 aa13.11□□□□□ -0.31
NCL-207ENST00000461347 NPEPL1Q8NDH3 523 aa13.11□□□□□ -0.31
NCL-207ENST00000461347 HHIPL1Q96JK4 782 aa13.11□□□□□ -0.31
NCL-207ENST00000461347 PIGMQ9H3S5 423 aa13.11□□□□□ -0.31
NCL-207ENST00000461347 ZNF223Q9UK11 482 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms