RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 PTPRFP10586 1907 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 OR6C6A6NF89 314 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 ZNF724A8MTY0 619 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 SLC25A4P12235 298 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 HTRA3P83110 453 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 GLO1Q04760 184 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 MELKQ14680 651 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 SLC35D2Q76EJ3 337 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 HLA-CQ95604 372 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 KCNS2Q9ULS6 477 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 GP1BAP07359 652 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 GNB3P16520 340 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 GABRR1P24046 479 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 DDTP30046 118 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 PDX1P52945 283 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 CRMP1Q14194 572 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 GUCA2BQ16661 112 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 SLC43A2Q8N370 569 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 OR5AP2Q8NGF4 316 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 IHHQ14623 411 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 USP53Q70EK8 1073 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 SIRT6Q8N6T7 355 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 OR8D2Q9GZM6 311 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 MYO9AB2RTY4 2548 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 NPIPA5A0A0B4J1W7 369 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 SLC5A10A0PJK1 596 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 NPIPA7E9PJI5 369 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 TNFSF12O43508 249 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 NPIPA8P0DM63 369 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 CLRN1P58418 232 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 ENY2Q9NPA8 101 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 IGLV3-10A0A075B6K4 115 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 CNOT4O95628 575 aaKnown RBP7.22□□□□□ -1.25
SMG1-202ENST00000446231 DHPSP49366 369 aaPredicted RBP7.22□□□□□ -1.25
SMG1-202ENST00000446231 MCEMP1Q8IX19 187 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 BSCL2Q96G97 398 aaPredicted RBP7.22□□□□□ -1.25
SMG1-202ENST00000446231 SLC7A11Q9UPY5 501 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 ING1Q9UK53 422 aaPredicted RBP7.22□□□□□ -1.25
SMG1-202ENST00000446231 AKR7A3O95154 331 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 ANKRD9Q96BM1 317 aaPredicted RBP7.22□□□□□ -1.25
SMG1-202ENST00000446231 LMAN1LQ9HAT1 526 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 RGPD1P0DJD0 1748 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 ZNF528Q3MIS6 628 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 TMEM244Q5VVB8 128 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 PSRC1Q6PGN9 363 aaPredicted RBP7.22□□□□□ -1.25
SMG1-202ENST00000446231 LMNTD1Q8N9Z9 388 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 OR4C5Q8NGB2 326 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 GCDHQ92947 438 aaPredicted RBP7.22□□□□□ -1.25
SMG1-202ENST00000446231 YIPF1Q9Y548 306 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 A0A087WV62 115 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 NPPBP16860 134 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 CRABP1P29762 137 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 C21orf58P58505 322 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 RAB31Q13636 194 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 SLC35D3Q5M8T2 416 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 SEC11CQ9BY50 192 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 SLC39A9Q9NUM3 307 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 COPS7AQ9UBW8 275 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 MOKQ9UQ07 419 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 LSM2Q9Y333 95 aaKnown RBP7.22□□□□□ -1.25
SMG1-202ENST00000446231 CD300LBA8K4G0 201 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 SLC11A1P49279 550 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 PLPP7Q8NBV4 271 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 TREM2Q9NZC2 230 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 RHBDD3Q9Y3P4 386 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 CEBPZOSA8MTT3 80 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 GNRH1P01148 92 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 RPL12P30050 165 aaKnown RBP7.22□□□□□ -1.25
SMG1-202ENST00000446231 CD70P32970 193 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 ZNF792Q3KQV3 632 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 CMTM1Q8IZ96 169 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 BCL2L10Q9HD36 194 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 PARD6AQ9NPB6 346 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 CTNSO60931 367 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 RECKO95980 971 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 OR7E24Q6IFN5 339 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 NKAIN4Q8IVV8 208 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 LINC00597Q9H2U6 94 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 MED16Q9Y2X0 877 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 IGLON5A6NGN9 336 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 TCF21O43680 179 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 SELENOFO60613 162 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 YIF1AO95070 293 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 ANKRD34CP0C6C1 535 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 METTL15P1P0C7V9 234 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 PCP4P48539 62 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 COX15Q7KZN9 410 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 ZNF429Q86V71 674 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 RBMXL1Q96E39 390 aaKnown RBP7.22□□□□□ -1.25
SMG1-202ENST00000446231 FOXN4Q96NZ1 517 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 WDR76Q9H967 626 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 GPR173Q9NS66 373 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 HPP00738 406 aa7.22□□□□□ -1.25
SMG1-202ENST00000446231 HOXD9P28356 352 aaPredicted RBP7.22□□□□□ -1.25
SMG1-202ENST00000446231 GPR55Q9Y2T6 319 aaPredicted RBP7.22□□□□□ -1.25
SMG1-202ENST00000446231 DNASE2O00115 360 aaPredicted RBP7.21□□□□□ -1.25
SMG1-202ENST00000446231 ICAM2P13598 275 aa7.21□□□□□ -1.25
SMG1-202ENST00000446231 ABCD3P28288 659 aa7.21□□□□□ -1.25
SMG1-202ENST00000446231 MTCP1P56278 107 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms