RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 PBX2P40425 430 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 OR4N5Q8IXE1 308 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 CMTM8Q8IZV2 173 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 CDS1Q92903 461 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 NMNAT3Q96T66 252 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 ARHGDIGQ99819 225 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 SLC6A7Q99884 636 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 RNF122Q9H9V4 155 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 TAS2R8Q9NYW2 309 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 DOCK3Q8IZD9 2030 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 RTTNQ86VV8 2226 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 XRCC3O43542 346 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 CD96P40200 585 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 MAP2K5Q13163 448 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 CDNFQ49AH0 187 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 C10orf91Q5T1B1 145 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 PHF19Q5T6S3 580 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 NKAIN2Q5VXU1 208 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 OR2A2Q6IF42 318 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 GJD3Q8N144 294 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF676Q8N7Q3 588 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 OR2G2Q8NGZ5 317 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 SMIM3Q9BZL3 60 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 DPEP2Q9H4A9 486 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 LHX9Q9NQ69 397 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 OR6C6A6NF89 314 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 ELOA3DA6NLF2 546 aaPredicted RBP6.79□□□□□ -1.32
CPSF6-202ENST00000435070 C4orf47A7E2U8 309 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 NDUFS4O43181 175 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 EMC8O43402 210 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 IFNGP01579 166 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 CD79AP11912 226 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 GSK3AP49840 483 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 RAB5CP51148 216 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 ELOA3BQ3SY89 546 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 GFI1BQ5VTD9 330 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF227Q86WZ6 799 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 ELOA3Q8NG57 546 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 TMEM106AQ96A25 262 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 OCSTAMPQ9BR26 566 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 MS4A8Q9BY19 250 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 GSKIPQ9P0R6 139 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 COPS7AQ9UBW8 275 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 PPIHO43447 177 aaKnown RBP6.78□□□□□ -1.32
CPSF6-202ENST00000435070 ACTR1BP42025 376 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 RBP2P50120 134 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 FABP6P51161 128 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 OR4C11Q6IEV9 310 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 RPL13AP3Q6NVV1 102 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 GAR1Q9NY12 217 aaKnown RBP6.78□□□□□ -1.32
CPSF6-202ENST00000435070 CKLFQ9UBR5 152 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 LPAR3Q9UBY5 353 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 SIGLEC7Q9Y286 467 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 TMED7Q9Y3B3 224 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 TSPAN11A1L157 253 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 PRR32B1ATL7 298 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 CTAG2O75638 210 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 OR8U9P0C7N5 309 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 FOLR2P14207 255 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 SERPINF1P36955 418 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 CAV2P51636 162 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 HGFACQ04756 655 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF345Q14585 488 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 OR1Q1Q15612 314 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 CLLU1OSQ5K130 101 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 ETFRF1Q6IPR1 90 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 CHRDL2Q6WN34 429 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 CLEC1AQ8NC01 280 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 OR8U1Q8NH10 309 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 TMEM68Q96MH6 324 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF700Q9H0M5 742 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 CALML5Q9NZT1 146 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 MED31Q9Y3C7 131 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 NLRC5Q86WI3 1866 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 TSTD3H0UI37 97 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 CYB5AP00167 134 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 CD8AP01732 235 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 PET100P0DJ07 73 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 GNALP38405 381 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 TSFMP43897 325 aaKnown RBP6.78□□□□□ -1.32
CPSF6-202ENST00000435070 TAS2R60P59551 318 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 ID2Q02363 134 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 BIVMQ86UB2 503 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 PLD4Q96BZ4 506 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 SLC35A4Q96G79 324 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 PRSS27Q9BQR3 290 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 SGPP1Q9BX95 441 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 LGR4Q9BXB1 951 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 GPR61Q9BZJ8 451 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 EIF5A2Q9GZV4 153 aaKnown RBP6.78□□□□□ -1.32
CPSF6-202ENST00000435070 DNAJB11Q9UBS4 358 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 ERI3O43414 337 aaKnown RBP6.78□□□□□ -1.32
CPSF6-202ENST00000435070 MOSPD3O75425 235 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 RAD51DO75771 328 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 SNRPCP09234 159 aaKnown RBP6.78□□□□□ -1.32
CPSF6-202ENST00000435070 PSMB6P28072 239 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 CMPK1P30085 196 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 MAPK8P45983 427 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 DCST2Q5T1A1 773 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 PLPP7Q8NBV4 271 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms