RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 CAB39Q9Y376 341 aaPredicted RBP9.98□□□□□ -0.81
LINC00539-203ENST00000434601 CEPT1Q9Y6K0 416 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 NCOA6Q14686 2063 aaPredicted RBP9.98□□□□□ -0.81
LINC00539-203ENST00000434601 CSMD1Q96PZ7 3565 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 ADGRG4Q8IZF6 3080 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 ANKRD17O75179 2603 aaKnown RBP9.97□□□□□ -0.81
LINC00539-203ENST00000434601 A0A1W2PQL4 384 aaPredicted RBP9.97□□□□□ -0.81
LINC00539-203ENST00000434601 OR14I1A6ND48 311 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 CCDC160A6NGH7 325 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 ZNF670-ZNF695F2Z2N8 137 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 GPR171O14626 319 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 SLC43A1O75387 559 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 AQP8O94778 261 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 ZNF432O94892 652 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 HSMCR30P0CW71 290 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 FCGR2AP12318 317 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 PRF1P14222 555 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 PTGS2P35354 604 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 CD79BP40259 229 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 CA7P43166 264 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 SELENOPP49908 381 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 ZNF133P52736 654 aaPredicted RBP9.97□□□□□ -0.81
LINC00539-203ENST00000434601 ACTA2P62736 377 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 ACTG2P63267 376 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 ZNF85Q03923 595 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 MLLT11Q13015 90 aaPredicted RBP9.97□□□□□ -0.81
LINC00539-203ENST00000434601 DOC2BQ14184 412 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 ETFDHQ16134 617 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 ARMCX4Q5H9R4 360 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 XKRXQ6PP77 449 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 ZNF322Q6U7Q0 402 aaPredicted RBP9.97□□□□□ -0.81
LINC00539-203ENST00000434601 TMPRSS11AQ6ZMR5 421 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 AAED1Q7RTV5 226 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 MRGPRGQ86SM5 289 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 CDC20BQ86Y33 519 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 GLB1L2Q8IW92 636 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 C20orf196Q8IYI0 205 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 RFLNBQ8N5W9 214 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 SLC26A10Q8NG04 563 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 OR6N1Q8NGY5 312 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 SMAP2Q8WU79 429 aaPredicted RBP9.97□□□□□ -0.81
LINC00539-203ENST00000434601 SPRYD4Q8WW59 207 aaPredicted RBP9.97□□□□□ -0.81
LINC00539-203ENST00000434601 NSMAFQ92636 917 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 MCHR2Q969V1 340 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 INTS12Q96CB8 462 aaKnown RBP9.97□□□□□ -0.81
LINC00539-203ENST00000434601 YIPF6Q96EC8 236 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 MRPL48Q96GC5 212 aaKnown RBP9.97□□□□□ -0.81
LINC00539-203ENST00000434601 GPR137Q96N19 417 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 FOXN4Q96NZ1 517 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 OPALINQ96PE5 141 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 MGLLQ99685 303 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 WDR76Q9H967 626 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 RNF122Q9H9V4 155 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 BCO1Q9HAY6 547 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 MRPL22Q9NWU5 206 aaKnown RBP9.97□□□□□ -0.81
LINC00539-203ENST00000434601 GLTPQ9NZD2 209 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 FOXD3Q9UJU5 478 aaPredicted RBP9.97□□□□□ -0.81
LINC00539-203ENST00000434601 COPS3Q9UNS2 423 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 F8P00451 2351 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 ZNF407Q9C0G0 2248 aa9.97□□□□□ -0.81
LINC00539-203ENST00000434601 FBN2P35556 2912 aa9.96□□□□□ -0.81
LINC00539-203ENST00000434601 CCDC168Q8NDH2 2452 aa9.96□□□□□ -0.81
LINC00539-203ENST00000434601 A0A1B0GTH9 108 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 A0A1W2PPL8 197 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 SLC22A20A6NK97 555 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 ZNF724A8MTY0 619 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 H3BSA7 217 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 PHYHO14832 338 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 NOL3O60936 208 aaKnown RBP9.96□□□□□ -0.82
LINC00539-203ENST00000434601 WISP2O76076 250 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 MT-ND5P03915 603 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 HRGP04196 525 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 SCG5P05408 212 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 QDPRP09417 244 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 SPARCP09486 303 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 COX6B1P14854 86 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 AGAP20933 346 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 TGFBR2P37173 567 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 LIPAP38571 399 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 CAPZA2P47755 286 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 ENTPD1P49961 510 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 HCCSP53701 268 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 ADAM8P78325 824 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 TSTQ16762 297 aaKnown RBP9.96□□□□□ -0.82
LINC00539-203ENST00000434601 CDONQ4KMG0 1287 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 KRTCAP3Q53RY4 240 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 C10orf128Q5T292 105 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 GPR107Q5VW38 600 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 PLXDC2Q6UX71 529 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 SSX6Q7RTT6 188 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.96□□□□□ -0.82
LINC00539-203ENST00000434601 ZNF485Q8NCK3 441 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 ZNF420Q8TAQ5 688 aaPredicted RBP9.96□□□□□ -0.82
LINC00539-203ENST00000434601 GATAD2BQ8WXI9 593 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 ZNF775Q96BV0 537 aaPredicted RBP9.96□□□□□ -0.82
LINC00539-203ENST00000434601 CCDC120Q96HB5 630 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 C4orf36Q96KX1 117 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 MYCBPQ99417 103 aaPredicted RBP9.96□□□□□ -0.82
LINC00539-203ENST00000434601 TTTY10Q9BZA0 68 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 ULBP2Q9BZM5 246 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms