RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 ACTRT3Q9BYD9 372 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 XIRP2A4UGR9 3374 aa14.52□□□□□ -0.09
PKP4-205ENST00000426248 TSTD3H0UI37 97 aa14.52□□□□□ -0.09
PKP4-205ENST00000426248 DNAJB6O75190 326 aa14.52□□□□□ -0.09
PKP4-205ENST00000426248 ACY1Q03154 408 aa14.52□□□□□ -0.09
PKP4-205ENST00000426248 C2orf68Q2NKX9 166 aa14.52□□□□□ -0.09
PKP4-205ENST00000426248 PMS2CLQ68D20 193 aa14.52□□□□□ -0.09
PKP4-205ENST00000426248 TPRA1Q86W33 373 aa14.52□□□□□ -0.09
PKP4-205ENST00000426248 NRMQ8IXM6 262 aa14.52□□□□□ -0.09
PKP4-205ENST00000426248 ZNF561Q8N587 486 aa14.52□□□□□ -0.09
PKP4-205ENST00000426248 TMEM41AQ96HV5 264 aa14.52□□□□□ -0.09
PKP4-205ENST00000426248 CLCC1Q96S66 551 aa14.52□□□□□ -0.09
PKP4-205ENST00000426248 MENTQ9BUN1 341 aa14.52□□□□□ -0.09
PKP4-205ENST00000426248 RGCCQ9H4X1 137 aa14.52□□□□□ -0.09
PKP4-205ENST00000426248 PPP4R1LQ9P1A2 415 aa14.52□□□□□ -0.09
PKP4-205ENST00000426248 LILRA5A6NI73 299 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 ACOD1A6NK06 481 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 TCAPO15273 167 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 NUDT21O43809 227 aaKnown RBP14.51□□□□□ -0.09
PKP4-205ENST00000426248 HEXBP07686 556 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 FBP1P09467 338 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 GKN3PP0CG01 181 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 EPHA8P29322 1005 aaPredicted RBP14.51□□□□□ -0.09
PKP4-205ENST00000426248 RAB5CP51148 216 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 FZD5Q13467 585 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 C3orf33Q6P1S2 294 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 ARIH2OSQ8N7S6 290 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 OR2T33Q8NG76 320 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 OR52R1Q8NGF1 315 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 OR6T1Q8NGN1 323 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 OR6K3Q8NGY3 331 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 GPA33Q99795 319 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 ZNF230Q9UIE0 474 aaPredicted RBP14.51□□□□□ -0.09
PKP4-205ENST00000426248 POLR1DQ9Y2S0 133 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 CDC14CA4D256 554 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 PMS2P1A4D2B8 440 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 A6NCN8 305 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 BTBD17A6NE02 478 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 GGT3PA6NGU5 568 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 A6NLC8 198 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 HMSDA8MTL9 139 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 CLN5O75503 358 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 RPP14O95059 124 aaKnown RBP14.51□□□□□ -0.09
PKP4-205ENST00000426248 CTSBP07858 339 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 SPI1P17947 270 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 CD1CP29017 333 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 PPIAP62937 165 aaKnown RBP14.51□□□□□ -0.09
PKP4-205ENST00000426248 VWA2Q5GFL6 755 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 RABEPKQ7Z6M1 372 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 NAXEQ8NCW5 288 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 GRHL3Q8TE85 626 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 OR7D2Q96RA2 312 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 ABRACLQ9P1F3 81 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 C17orf105B2RV13 164 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 TMEM229AB2RXF0 380 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 OR2T1O43869 369 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 CD80P33681 288 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 MPLP40238 635 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 PSMB10P40306 273 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 OR10K2Q6IF99 312 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 ZNF770Q6IQ21 691 aaPredicted RBP14.51□□□□□ -0.09
PKP4-205ENST00000426248 ETV3LQ6ZN32 361 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 C17orf47Q8NEP4 570 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 OSTF1Q92882 214 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 MOAP1Q96BY2 351 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 TRBV2A0A0J9YWF9 115 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 ZNF729A6NN14 1252 aaPredicted RBP14.51□□□□□ -0.09
PKP4-205ENST00000426248 TERTO14746 1132 aaKnown RBP14.51□□□□□ -0.09
PKP4-205ENST00000426248 HCRTR1O43613 425 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 TBXA2RP21731 343 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 MNDAP41218 407 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 RBM34P42696 430 aaKnown RBP14.51□□□□□ -0.09
PKP4-205ENST00000426248 BIKQ13323 160 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 BAIAP2L2Q6UXY1 529 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 PRICKLE2Q7Z3G6 844 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 OR51S1Q8NGJ8 323 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 IFI44Q8TCB0 444 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.51□□□□□ -0.09
PKP4-205ENST00000426248 UBL7Q96S82 380 aaPredicted RBP14.51□□□□□ -0.09
PKP4-205ENST00000426248 WFDC6Q9BQY6 131 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 TCF7L1Q9HCS4 588 aa14.51□□□□□ -0.09
PKP4-205ENST00000426248 COL4A3Q01955 1670 aa14.5□□□□□ -0.09
PKP4-205ENST00000426248 TMEM72A0PK05 275 aa14.5□□□□□ -0.09
PKP4-205ENST00000426248 TRAPPC13A5PLN9 417 aa14.5□□□□□ -0.09
PKP4-205ENST00000426248 YIF1AO95070 293 aa14.5□□□□□ -0.09
PKP4-205ENST00000426248 MST1P26927 711 aa14.5□□□□□ -0.09
PKP4-205ENST00000426248 EPHA4P54764 986 aa14.5□□□□□ -0.09
PKP4-205ENST00000426248 RAB38P57729 211 aa14.5□□□□□ -0.09
PKP4-205ENST00000426248 CCL7P80098 99 aa14.5□□□□□ -0.09
PKP4-205ENST00000426248 GPR32P1Q8NGA4 272 aa14.5□□□□□ -0.09
PKP4-205ENST00000426248 CCDC107Q8WV48 283 aa14.5□□□□□ -0.09
PKP4-205ENST00000426248 DNASE2BQ8WZ79 361 aa14.5□□□□□ -0.09
PKP4-205ENST00000426248 SLC25A36Q96CQ1 311 aa14.5□□□□□ -0.09
PKP4-205ENST00000426248 NEURL3Q96EH8 262 aa14.5□□□□□ -0.09
PKP4-205ENST00000426248 ACKR4Q9NPB9 350 aa14.5□□□□□ -0.09
PKP4-205ENST00000426248 HINT3Q9NQE9 182 aaKnown RBP14.5□□□□□ -0.09
PKP4-205ENST00000426248 ARGFXA6NJG6 315 aa14.5□□□□□ -0.09
PKP4-205ENST00000426248 SCRG1O75711 98 aa14.5□□□□□ -0.09
PKP4-205ENST00000426248 RIDAP52758 137 aaKnown RBP14.5□□□□□ -0.09
PKP4-205ENST00000426248 IKZF1Q13422 519 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms