RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 CYB5AP00167 134 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 NAGAP17050 411 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 ADAM8P78325 824 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 DMWDQ09019 674 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 FUT7Q11130 342 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 UBXN2BQ14CS0 331 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 GLT8D1Q68CQ7 371 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 LRFN4Q6PJG9 635 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 OVCH2Q7RTZ1 564 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 MARCH3Q86UD3 253 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 NAXDQ8IW45 347 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 SLC22A18ASQ8N1D0 253 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 PXT1Q8NFP0 134 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 OR51A2Q8NGJ7 313 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 OR1J2Q8NGS2 313 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 SLC25A44Q96H78 314 aaPredicted RBP6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF578Q96N58 590 aaPredicted RBP6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 ARPC5LQ9BPX5 153 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF471Q9BX82 626 aaPredicted RBP6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 POTEKPQ9BYX7 375 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 RTN4RQ9BZR6 473 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 CKLFQ9UBR5 152 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 TMEM184BQ9Y519 407 aaPredicted RBP6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 OR5H14A6NHG9 310 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 RFPL4AA6NLU0 287 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 RFPL4AL1F8VTS6 287 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 MPZL1O95297 269 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 WISP1O95388 367 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 CD2P06729 351 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 CSRP1P21291 193 aaKnown RBP6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 HTR2CP28335 458 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 DNASE1L1P49184 302 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 LUMP51884 338 aaPredicted RBP6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 TAS2R19P59542 299 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 ACTBP60709 375 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 SKP1P63208 163 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 ACTG1P63261 375 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 ACKR1Q16570 336 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 SLC18B1Q6NT16 456 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 FBXO46Q6PJ61 603 aaPredicted RBP6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 TMEM92Q6UXU6 159 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 BPIFB2Q8N4F0 458 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 CHST4Q8NCG5 386 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 ST8SIA2Q92186 375 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 OR8B4Q96RC9 309 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 SLC38A3Q99624 504 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 PBX4Q9BYU1 374 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 COMMD9Q9P000 198 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 MRTO4Q9UKD2 239 aaKnown RBP6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 CLDN16Q9Y5I7 305 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 TRANK1O15050 2925 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 KIR2DS5A0A0G2JLQ3 304 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 A0A0G2JNG1 304 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 TCRBV21S2A2A0A5A6 115 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 TMEM235A6NFC5 223 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF736B4DX44 427 aaPredicted RBP6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 KIR2DS3K7RE56 304 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 PMS2P2O95744 297 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 OR1D4P47884 311 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 MFGE8Q08431 387 aaPredicted RBP6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 EIF2B1Q14232 305 aaKnown RBP6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 KIR2DS5Q14953 304 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 TMEM225Q6GV28 225 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 DNM1P46Q6ZS02 220 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 ACBD4Q8NC06 268 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 OR6K3Q8NGY3 331 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 FAM174AQ8TBP5 190 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 GPBAR1Q8TDU6 330 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 GPX8Q8TED1 209 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 CASTOR1Q8WTX7 329 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 ASB12Q8WXK4 309 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 FAM131CQ96AQ9 280 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 MRPS24Q96EL2 167 aaKnown RBP6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF75AQ96N20 296 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 MSRAQ9UJ68 235 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 MRPS18BQ9Y676 258 aaKnown RBP6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 DENND4AQ7Z401 1863 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 TDRD6O60522 2096 aaKnown RBP6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 TRAV14DV4A0A0A6YYC5 116 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 KANTRA0A1W2PQU2 76 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 ICOSLGO75144 302 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 TXNDC12O95881 172 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 HPP00738 406 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 CD34P28906 385 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 MPGP29372 298 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 CALCRP30988 508 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 YPEL5P62699 121 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 NR0B2Q15466 257 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 PRTGQ2VWP7 1150 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 MOGAT2Q3SYC2 334 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 CDNFQ49AH0 187 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 TFAP2EQ6VUC0 442 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 HSD17B13Q7Z5P4 300 aaPredicted RBP6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 TMEM151BQ8IW70 566 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF679Q8IYX0 411 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 OR52H1Q8NGJ2 320 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 LDAHQ9H6V9 325 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 MED9Q9NWA0 146 aa6.78□□□□□ -1.32
SMARCC1-202ENST00000425518 HRH3Q9Y5N1 445 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms