RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 NFKBIDQ8NI38 313 aa14.04□□□□□ -0.16
CHCHD3-202ENST00000423635 DACT3Q96B18 629 aaPredicted RBP14.04□□□□□ -0.16
CHCHD3-202ENST00000423635 SIGLEC11Q96RL6 698 aa14.04□□□□□ -0.16
CHCHD3-202ENST00000423635 ZNF347Q96SE7 839 aa14.04□□□□□ -0.16
CHCHD3-202ENST00000423635 ARHGDIGQ99819 225 aa14.04□□□□□ -0.16
CHCHD3-202ENST00000423635 KCNN2Q9H2S1 579 aa14.04□□□□□ -0.16
CHCHD3-202ENST00000423635 LRCH1Q9Y2L9 728 aa14.04□□□□□ -0.16
CHCHD3-202ENST00000423635 CH25HO95992 272 aa14.03□□□□□ -0.16
CHCHD3-202ENST00000423635 SELEP16581 610 aa14.03□□□□□ -0.16
CHCHD3-202ENST00000423635 TNFRSF1AP19438 455 aa14.03□□□□□ -0.16
CHCHD3-202ENST00000423635 BGNP21810 368 aa14.03□□□□□ -0.16
CHCHD3-202ENST00000423635 RBMXP38159 391 aaKnown RBP14.03□□□□□ -0.16
CHCHD3-202ENST00000423635 CLRN1P58418 232 aa14.03□□□□□ -0.16
CHCHD3-202ENST00000423635 PPP1CBP62140 327 aa14.03□□□□□ -0.16
CHCHD3-202ENST00000423635 MRPS34P82930 218 aaKnown RBP14.03□□□□□ -0.16
CHCHD3-202ENST00000423635 IFFO1Q0D2I5 559 aa14.03□□□□□ -0.16
CHCHD3-202ENST00000423635 DEFB112Q30KQ8 113 aa14.03□□□□□ -0.16
CHCHD3-202ENST00000423635 C10orf128Q5T292 105 aa14.03□□□□□ -0.16
CHCHD3-202ENST00000423635 ZNF613Q6PF04 617 aa14.03□□□□□ -0.16
CHCHD3-202ENST00000423635 FIP1L1Q6UN15 594 aaKnown RBP14.03□□□□□ -0.16
CHCHD3-202ENST00000423635 BTNL3Q6UXE8 466 aa14.03□□□□□ -0.16
CHCHD3-202ENST00000423635 Q6YL49 198 aa14.03□□□□□ -0.16
CHCHD3-202ENST00000423635 RANBP3LQ86VV4 465 aaPredicted RBP14.03□□□□□ -0.16
CHCHD3-202ENST00000423635 POU5F2Q8N7G0 328 aa14.03□□□□□ -0.16
CHCHD3-202ENST00000423635 SLCO1B3Q9NPD5 702 aa14.03□□□□□ -0.16
CHCHD3-202ENST00000423635 NANSQ9NR45 359 aa14.03□□□□□ -0.16
CHCHD3-202ENST00000423635 SDR39U1Q9NRG7 319 aaPredicted RBP14.03□□□□□ -0.16
CHCHD3-202ENST00000423635 PRORSD1PA6NEY8 169 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 TRPC5OSA6NMA1 111 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 HDAC3O15379 428 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 CHP2O43745 196 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 FMO6PO60774 539 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 ASAH2BP0C7U1 165 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 ZNF32P17041 273 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 MDH2P40926 338 aaKnown RBP14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 GDI2P50395 445 aaKnown RBP14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 POLR2JP52435 117 aaKnown RBP14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 BPIFB3P59826 476 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 CDK6Q00534 326 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 PSG4Q00888 419 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 HLXQ14774 488 aaPredicted RBP14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 CEP85LQ5SZL2 805 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 ZNF774Q6NX45 483 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 ZER1Q7Z7L7 766 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 TMEM86BQ8N661 226 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 OR10S1Q8NGN2 331 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 RAB40AQ8WXH6 277 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 UBE2FQ969M7 185 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 ZDHHC16Q969W1 377 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 THOC1Q96FV9 657 aaKnown RBP14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 MAELQ96JY0 434 aaKnown RBP14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 SSBP3Q9BWW4 388 aaPredicted RBP14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 NANOGQ9H9S0 305 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 SSU72Q9NP77 194 aaKnown RBP14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 CCNB1IP1Q9NPC3 277 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 NOX4Q9NPH5 578 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 ZNF229Q9UJW7 825 aa14.02□□□□□ -0.17
CHCHD3-202ENST00000423635 TRAV40A0A0B4J280 105 aa14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 IGHV2-70DA0A0C4DH43 119 aa14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 KIR2DS1A0A191URI9 304 aa14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 CEACAM18A8MTB9 384 aa14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 CLPXO76031 633 aa14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 ALX3O95076 343 aa14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 RPL15P61313 204 aaKnown RBP14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 BST1Q10588 318 aa14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 PSG7Q13046 419 aa14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 TAF9Q16594 264 aa14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 GCNT6Q5T4J0 391 aa14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 RFPL4BQ6ZWI9 263 aa14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 MUC20Q8N307 709 aaPredicted RBP14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 C10orf111Q8N326 155 aa14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 NOXO1Q8NFA2 376 aa14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 ABHD4Q8TB40 342 aa14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 NABP1Q96AH0 204 aa14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 ZNF607Q96SK3 696 aa14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 MCHR1Q99705 422 aa14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 TMEM109Q9BVC6 243 aa14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 IL19Q9UHD0 177 aa14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 UGT2A1Q9Y4X1 527 aa14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 GMEB1Q9Y692 573 aa14.01□□□□□ -0.17
CHCHD3-202ENST00000423635 TMEM178BH3BS89 294 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 SERPINB7O75635 380 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 TRMUO75648 421 aaKnown RBP14□□□□□ -0.17
CHCHD3-202ENST00000423635 LYPD3O95274 346 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 TGDSO95455 350 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 HIST1H2ABP04908 130 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 ACADSP16219 412 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 TNFSF4P23510 183 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 CDAP32320 146 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 PDCD1Q15116 288 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 TTC33Q6PID6 262 aaPredicted RBP14□□□□□ -0.17
CHCHD3-202ENST00000423635 HIST3H2AQ7L7L0 130 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 C1QL4Q86Z23 238 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 OR9I1Q8NGQ6 314 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 AKR7LQ8NHP1 331 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 HIST1H2ACQ93077 130 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 C4orf45Q96LM5 186 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 CHIAQ9BZP6 476 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 TMEM38AQ9H6F2 299 aa14□□□□□ -0.17
CHCHD3-202ENST00000423635 SMURF2Q9HAU4 748 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms