RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 C20orf141Q9NUB4 165 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 HCFC2Q9Y5Z7 792 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 CNOT1A5YKK6 2376 aaKnown RBP11.81□□□□□ -0.52
SCN1B-202ENST00000415950 KCNE1BA0A087WTH5 132 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 TMEM235A6NFC5 223 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 IMPA2O14732 288 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 ATG12O94817 140 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 IGHG1P01857 330 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 CD3DP04234 171 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 CTSLP07711 333 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 ACSM4P0C7M7 580 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 IL2RGP31785 369 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 MPEG1Q2M385 716 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 PDLIM3Q53GG5 364 aaPredicted RBP11.81□□□□□ -0.52
SCN1B-202ENST00000415950 NHLRC1Q6VVB1 395 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 MARCH3Q86UD3 253 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 CCL4L1Q8NHW4 92 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 MARC2Q969Z3 335 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 BANF2Q9H503 90 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 TRPM6Q9BX84 2022 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 ERVH48-1M5A8F1 160 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 MPPED1O15442 326 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 IGHA2P01877 340 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 CNR1P21554 472 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 MRPL19P49406 292 aaKnown RBP11.81□□□□□ -0.52
SCN1B-202ENST00000415950 MAP2K6P52564 334 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 ABHD17BQ5VST6 288 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 SSX9Q7RTT3 188 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 ADIPOR2Q86V24 386 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 BPHLQ86WA6 291 aaPredicted RBP11.81□□□□□ -0.52
SCN1B-202ENST00000415950 ZNF439Q8NDP4 499 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 CPT1CQ8TCG5 803 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 PIGTQ969N2 578 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 TOE1Q96GM8 510 aaKnown RBP11.81□□□□□ -0.52
SCN1B-202ENST00000415950 SLC25A31Q9H0C2 315 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 TAS2R5Q9NYW4 299 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 TRAPPC4Q9Y296 219 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 PTRH2Q9Y3E5 179 aaKnown RBP11.81□□□□□ -0.52
SCN1B-202ENST00000415950 MDFIC2A0A1B0GVS7 189 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 SERINC4A6NH21 518 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 HSBP1L1C9JCN9 74 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 SYT5O00445 386 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 MT-CO2P00403 227 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 FOSL1P15407 271 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 CCR2P41597 374 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 REEP5Q00765 189 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 ALKBH1Q13686 389 aaKnown RBP11.8□□□□□ -0.52
SCN1B-202ENST00000415950 OGFOD3Q6PK18 319 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 ZNF578Q96N58 590 aaPredicted RBP11.8□□□□□ -0.52
SCN1B-202ENST00000415950 SH3BGRL2Q9UJC5 107 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 PCDHGA5Q9Y5G8 931 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 ZDBF2Q9HCK1 2354 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 SCAF4O95104 1147 aaKnown RBP11.8□□□□□ -0.52
SCN1B-202ENST00000415950 DPP4P27487 766 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 CD80P33681 288 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 RAB5CP51148 216 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 TAS2R30P59541 319 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 OR2B8PP59922 312 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 KCNRGQ8N5I3 272 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 LYSMD1Q96S90 227 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 SGPP1Q9BX95 441 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 SLC19A3Q9BZV2 496 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 C1orf198Q9H425 327 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 ANKRD19PQ9H560 264 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 CYSLTR2Q9NS75 346 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.8□□□□□ -0.52
SCN1B-202ENST00000415950 BHLHE40O14503 412 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 GPR137BO60478 399 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 CD14P08571 375 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 EPXP11678 715 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 SSTP61278 116 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 SCGB2A2Q13296 93 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 SLC39A5Q6ZMH5 540 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 GPA33Q99795 319 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 FGF22Q9HCT0 170 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 SLC22A13Q9Y226 551 aa11.8□□□□□ -0.52
SCN1B-202ENST00000415950 TRBV11-1A0A0K0K1C0 115 aa11.79□□□□□ -0.52
SCN1B-202ENST00000415950 MAN2B1O00754 1011 aa11.79□□□□□ -0.52
SCN1B-202ENST00000415950 EFSO43281 561 aa11.79□□□□□ -0.52
SCN1B-202ENST00000415950 SUSD5O60279 629 aa11.79□□□□□ -0.52
SCN1B-202ENST00000415950 F10P00742 488 aa11.79□□□□□ -0.52
SCN1B-202ENST00000415950 CPT2P23786 658 aa11.79□□□□□ -0.52
SCN1B-202ENST00000415950 ZNF93P35789 620 aaPredicted RBP11.79□□□□□ -0.52
SCN1B-202ENST00000415950 HTR5AP47898 357 aa11.79□□□□□ -0.52
SCN1B-202ENST00000415950 UBE2IP63279 158 aaKnown RBP11.79□□□□□ -0.52
SCN1B-202ENST00000415950 CDKN3Q16667 212 aa11.79□□□□□ -0.52
SCN1B-202ENST00000415950 TMEM41BQ5BJD5 291 aa11.79□□□□□ -0.52
SCN1B-202ENST00000415950 AADACL3Q5VUY0 350 aa11.79□□□□□ -0.52
SCN1B-202ENST00000415950 C12orf73Q69YU5 71 aa11.79□□□□□ -0.52
SCN1B-202ENST00000415950 MED25Q71SY5 747 aa11.79□□□□□ -0.52
SCN1B-202ENST00000415950 FAM71CQ8NEG0 241 aa11.79□□□□□ -0.52
SCN1B-202ENST00000415950 OR56B1Q8NGI3 324 aa11.79□□□□□ -0.52
SCN1B-202ENST00000415950 OR10Z1Q8NGY1 313 aa11.79□□□□□ -0.52
SCN1B-202ENST00000415950 CPNE4Q96A23 557 aaPredicted RBP11.79□□□□□ -0.52
SCN1B-202ENST00000415950 PYCARD-AS1I3L0S3 204 aa11.79□□□□□ -0.52
SCN1B-202ENST00000415950 CDC42EP2O14613 210 aa11.79□□□□□ -0.52
SCN1B-202ENST00000415950 HPXP02790 462 aa11.79□□□□□ -0.52
SCN1B-202ENST00000415950 ATP1B3P54709 279 aa11.79□□□□□ -0.52
SCN1B-202ENST00000415950 KIAA0141Q14154 515 aaPredicted RBP11.79□□□□□ -0.52
SCN1B-202ENST00000415950 ANGPTL5Q86XS5 388 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms