RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 TNFSF4P23510 183 aa13.97□□□□□ -0.17
CHMP3-203ENST00000409225 EPHA3P29320 983 aa13.97□□□□□ -0.17
CHMP3-203ENST00000409225 MDH2P40926 338 aaKnown RBP13.97□□□□□ -0.17
CHMP3-203ENST00000409225 SAMD8Q96LT4 415 aa13.97□□□□□ -0.17
CHMP3-203ENST00000409225 SIGLEC11Q96RL6 698 aa13.97□□□□□ -0.17
CHMP3-203ENST00000409225 SLC30A2Q9BRI3 323 aa13.97□□□□□ -0.17
CHMP3-203ENST00000409225 PRDM13Q9H4Q3 707 aa13.97□□□□□ -0.17
CHMP3-203ENST00000409225 WDR55Q9H6Y2 383 aaPredicted RBP13.97□□□□□ -0.17
CHMP3-203ENST00000409225 TCF7L1Q9HCS4 588 aa13.97□□□□□ -0.17
CHMP3-203ENST00000409225 RYR3Q15413 4870 aa13.96□□□□□ -0.17
CHMP3-203ENST00000409225 WNT2P09544 360 aa13.96□□□□□ -0.17
CHMP3-203ENST00000409225 TNFRSF1AP19438 455 aa13.96□□□□□ -0.17
CHMP3-203ENST00000409225 CDAP32320 146 aa13.96□□□□□ -0.17
CHMP3-203ENST00000409225 IFFO1Q0D2I5 559 aa13.96□□□□□ -0.17
CHMP3-203ENST00000409225 CDK5R2Q13319 367 aa13.96□□□□□ -0.17
CHMP3-203ENST00000409225 PDCD1Q15116 288 aa13.96□□□□□ -0.17
CHMP3-203ENST00000409225 ZNF74Q16587 644 aa13.96□□□□□ -0.17
CHMP3-203ENST00000409225 FAM205BPQ63HN1 556 aa13.96□□□□□ -0.17
CHMP3-203ENST00000409225 Q6YL49 198 aa13.96□□□□□ -0.17
CHMP3-203ENST00000409225 RANBP3LQ86VV4 465 aaPredicted RBP13.96□□□□□ -0.17
CHMP3-203ENST00000409225 KIRREL3Q8IZU9 778 aa13.96□□□□□ -0.17
CHMP3-203ENST00000409225 MUC20Q8N307 709 aaPredicted RBP13.96□□□□□ -0.17
CHMP3-203ENST00000409225 NOXO1Q8NFA2 376 aa13.96□□□□□ -0.17
CHMP3-203ENST00000409225 OR2Z1Q8NG97 314 aa13.96□□□□□ -0.17
CHMP3-203ENST00000409225 ITLN1Q8WWA0 313 aa13.96□□□□□ -0.17
CHMP3-203ENST00000409225 RAB40AQ8WXH6 277 aa13.96□□□□□ -0.17
CHMP3-203ENST00000409225 THOC1Q96FV9 657 aaKnown RBP13.96□□□□□ -0.17
CHMP3-203ENST00000409225 SPATA5L1Q9BVQ7 753 aa13.96□□□□□ -0.17
CHMP3-203ENST00000409225 RAD21L1Q9H4I0 556 aa13.96□□□□□ -0.17
CHMP3-203ENST00000409225 HAO1Q9UJM8 370 aa13.96□□□□□ -0.17
CHMP3-203ENST00000409225 SLC13A4Q9UKG4 626 aa13.96□□□□□ -0.17
CHMP3-203ENST00000409225 PPP1R3CQ9UQK1 317 aa13.96□□□□□ -0.17
CHMP3-203ENST00000409225 H3BSA7 217 aa13.95□□□□□ -0.18
CHMP3-203ENST00000409225 CLIC1O00299 241 aa13.95□□□□□ -0.18
CHMP3-203ENST00000409225 MGRN1O60291 552 aa13.95□□□□□ -0.18
CHMP3-203ENST00000409225 ZNF205O95201 554 aa13.95□□□□□ -0.18
CHMP3-203ENST00000409225 PRB2P02812 416 aaPredicted RBP13.95□□□□□ -0.18
CHMP3-203ENST00000409225 THRBP10828 461 aa13.95□□□□□ -0.18
CHMP3-203ENST00000409225 BMP2P12643 396 aa13.95□□□□□ -0.18
CHMP3-203ENST00000409225 RPS2P15880 293 aaKnown RBP13.95□□□□□ -0.18
CHMP3-203ENST00000409225 BGNP21810 368 aa13.95□□□□□ -0.18
CHMP3-203ENST00000409225 GNB2P62879 340 aa13.95□□□□□ -0.18
CHMP3-203ENST00000409225 ERVK-25P63136 954 aa13.95□□□□□ -0.18
CHMP3-203ENST00000409225 FADDQ13158 208 aa13.95□□□□□ -0.18
CHMP3-203ENST00000409225 TAF11Q15544 211 aa13.95□□□□□ -0.18
CHMP3-203ENST00000409225 HIST3H3Q16695 136 aa13.95□□□□□ -0.18
CHMP3-203ENST00000409225 SWT1Q5T5J6 900 aaKnown RBP13.95□□□□□ -0.18
CHMP3-203ENST00000409225 RUSC1-AS1Q66K80 236 aa13.95□□□□□ -0.18
CHMP3-203ENST00000409225 NXNQ6DKJ4 435 aa13.95□□□□□ -0.18
CHMP3-203ENST00000409225 ZNF774Q6NX45 483 aa13.95□□□□□ -0.18
CHMP3-203ENST00000409225 KRT73Q86Y46 540 aa13.95□□□□□ -0.18
CHMP3-203ENST00000409225 EIF1ADQ8N9N8 165 aaKnown RBP13.95□□□□□ -0.18
CHMP3-203ENST00000409225 SIAEQ9HAT2 523 aa13.95□□□□□ -0.18
CHMP3-203ENST00000409225 NOX4Q9NPH5 578 aa13.95□□□□□ -0.18
CHMP3-203ENST00000409225 NANSQ9NR45 359 aa13.95□□□□□ -0.18
CHMP3-203ENST00000409225 ASH2LQ9UBL3 628 aa13.95□□□□□ -0.18
CHMP3-203ENST00000409225 MCIDASD6RGH6 385 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 KPNA4O00629 521 aaPredicted RBP13.94□□□□□ -0.18
CHMP3-203ENST00000409225 BIRC5O15392 142 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 PIN1P1O15428 100 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 ERLIN1O75477 346 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 SLC2A10O95528 541 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 HIST1H2ABP04908 130 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 MELTFP08582 738 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 UMPSP11172 480 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 PSG4Q00888 419 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 PSG7Q13046 419 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 STX3Q13277 289 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 SGCAQ16586 387 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 GCNT6Q5T4J0 391 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 GPR157Q5UAW9 335 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 HHATQ5VTY9 493 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 REEP3Q6NUK4 255 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 MSANTD1Q6ZTZ1 278 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 HIST3H2AQ7L7L0 130 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 ZER1Q7Z7L7 766 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 KLBQ86Z14 1044 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 C1orf174Q8IYL3 243 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 TMEM86BQ8N661 226 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 LINC01006Q8NI28 216 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 HIST1H2ACQ93077 130 aa13.94□□□□□ -0.18
CHMP3-203ENST00000409225 NUDT16L1Q9BRJ7 211 aaKnown RBP13.94□□□□□ -0.18
CHMP3-203ENST00000409225 PAIP1Q9H074 479 aaKnown RBP13.94□□□□□ -0.18
CHMP3-203ENST00000409225 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.94□□□□□ -0.18
CHMP3-203ENST00000409225 C3orf80F5H4A9 247 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 G3V4G9 280 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 TMEM178BH3BS89 294 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 TRMUO75648 421 aaKnown RBP13.93□□□□□ -0.18
CHMP3-203ENST00000409225 CLPXO76031 633 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 IDO1P14902 403 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 ARHGDIAP52565 204 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 FGF12P61328 243 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 MRPS34P82930 218 aaKnown RBP13.93□□□□□ -0.18
CHMP3-203ENST00000409225 CDK6Q00534 326 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 BEAN1Q3B7T3 259 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 C10orf128Q5T292 105 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 LINC00114Q6XXX2 140 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 ZNF620Q6ZNG0 422 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 Q6ZPA2 131 aa13.93□□□□□ -0.18
CHMP3-203ENST00000409225 Q6ZR03 302 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms