RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 DVL3Q92997 716 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-203ENST00000409050 TNFRSF13CQ96RJ3 184 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 INSM2Q96T92 566 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-203ENST00000409050 DHRS9Q9BPW9 319 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 SLC35D1Q9NTN3 355 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 GFYI3L273 518 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 TPOP07202 933 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 FBXO45P0C2W1 286 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 SLURP2P0DP57 97 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 SHC1P29353 583 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 PPICP45877 212 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 GZMKP49863 264 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 CTSCP53634 463 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 PJVKQ0ZLH3 352 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 PMPCAQ10713 525 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 CRMP1Q14194 572 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 SLC17A1Q14916 467 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 IGFBP7Q16270 282 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 OR4Q3Q8NH05 313 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 LIPHQ8WWY8 451 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 SLCO4A1Q96BD0 722 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 ZNF764Q96H86 408 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-203ENST00000409050 HRASLSQ9HDD0 168 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 TM7SF3Q9NS93 570 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 KLF15Q9UIH9 416 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 SLC5A10A0PJK1 596 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 SH2D1BO14796 132 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 DSCR3O14972 297 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 BCL2L11O43521 198 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 TIMM8AO60220 97 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-203ENST00000409050 ICMTO60725 284 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 PDGFBP01127 241 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-203ENST00000409050 APEHP13798 732 aaKnown RBP5.6□□□□□ -1.51
SCN1A-203ENST00000409050 TNFRSF1BP20333 461 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 PTAFRP25105 342 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 KIR2DS2P43631 304 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 EVX1P49640 407 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 CLDN17P56750 224 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 CARD18P57730 90 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 C1orf61Q13536 156 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 C18orf21Q32NC0 220 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-203ENST00000409050 SYT14P1Q58G82 188 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 OR2G6Q5TZ20 316 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 FAHD2BQ6P2I3 314 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-203ENST00000409050 GALNT16Q8N428 558 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 OR10P1Q8NGE3 313 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 OR4D6Q8NGJ1 314 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 PP6455Q8WZ26 134 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 SMIM19Q96E16 107 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 SDSLQ96GA7 329 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 FAHD2AQ96GK7 314 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 MRGPRX4Q96LA9 322 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 LINC00615Q96LM1 132 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-203ENST00000409050 TEAD3Q99594 435 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 HAPLN2Q9GZV7 340 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 CACNG4Q9UBN1 327 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 PURGQ9UJV8 347 aaKnown RBP5.6□□□□□ -1.51
SCN1A-203ENST00000409050 A0A1B0GX78 115 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 TERTO14746 1132 aaKnown RBP5.6□□□□□ -1.51
SCN1A-203ENST00000409050 NXPH2O95156 264 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 OR2C1O95371 312 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 PGA3P0DJD8 388 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 TCN2P20062 427 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 ARRB2P32121 409 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 THBS4P35443 961 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 PDZK1IP1Q13113 114 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 CLINT1Q14677 625 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 GLIPR1L1Q6UWM5 242 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 SSX8Q7RTT4 187 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 LRRTM3Q86VH5 581 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 SLC38A6Q8IZM9 456 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 GABRG1Q8N1C3 465 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 SUMF1Q8NBK3 374 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 FBXO27Q8NI29 283 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 S1PR3Q99500 378 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 GLIPR2Q9H4G4 154 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 FBXL2Q9UKC9 423 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 ARFGEF2Q9Y6D5 1785 aa5.6□□□□□ -1.51
SCN1A-203ENST00000409050 H3BSH0 61 aa5.59□□□□□ -1.51
SCN1A-203ENST00000409050 NSA2O95478 260 aaKnown RBP5.59□□□□□ -1.51
SCN1A-203ENST00000409050 GP1BAP07359 652 aa5.59□□□□□ -1.51
SCN1A-203ENST00000409050 EN2P19622 333 aaPredicted RBP5.59□□□□□ -1.51
SCN1A-203ENST00000409050 NME2P22392 152 aa5.59□□□□□ -1.51
SCN1A-203ENST00000409050 MAOBP27338 520 aa5.59□□□□□ -1.51
SCN1A-203ENST00000409050 FGF9P31371 208 aaPredicted RBP5.59□□□□□ -1.51
SCN1A-203ENST00000409050 SLC6A12P48065 614 aa5.59□□□□□ -1.51
SCN1A-203ENST00000409050 SNU13P55769 128 aaKnown RBP5.59□□□□□ -1.51
SCN1A-203ENST00000409050 DMWDQ09019 674 aa5.59□□□□□ -1.51
SCN1A-203ENST00000409050 FXNQ16595 210 aa5.59□□□□□ -1.51
SCN1A-203ENST00000409050 ATP6V1FQ16864 119 aa5.59□□□□□ -1.51
SCN1A-203ENST00000409050 LYG2Q86SG7 212 aa5.59□□□□□ -1.51
SCN1A-203ENST00000409050 IL1F10Q8WWZ1 152 aa5.59□□□□□ -1.51
SCN1A-203ENST00000409050 NUDT16L1Q9BRJ7 211 aaKnown RBP5.59□□□□□ -1.51
SCN1A-203ENST00000409050 SMIM3Q9BZL3 60 aa5.59□□□□□ -1.51
SCN1A-203ENST00000409050 CXorf36Q9H7Y0 433 aa5.59□□□□□ -1.51
SCN1A-203ENST00000409050 STARD5Q9NSY2 213 aa5.59□□□□□ -1.51
SCN1A-203ENST00000409050 OCIAD1Q9NX40 245 aa5.59□□□□□ -1.51
SCN1A-203ENST00000409050 HDGFL3Q9Y3E1 203 aa5.59□□□□□ -1.51
SCN1A-203ENST00000409050 LAMB4A4D0S4 1761 aa5.59□□□□□ -1.51
SCN1A-203ENST00000409050 RNASEK-C17orf49H0YIS7 233 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms