RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 RIPK2O43353 540 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 ENSAO43768 121 aaKnown RBP7.68□□□□□ -1.18
NUP43-204ENST00000403890 CPSF4O95639 269 aaKnown RBP7.68□□□□□ -1.18
NUP43-204ENST00000403890 IGHV1-69P01742 117 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 FGF4P08620 206 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 NR2F1P10589 423 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 CBLP22681 906 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 GABRA5P31644 462 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 PITPNBP48739 271 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 ANXA11P50995 505 aaKnown RBP7.68□□□□□ -1.18
NUP43-204ENST00000403890 CLDN8P56748 225 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 EMX1Q04741 257 aaPredicted RBP7.68□□□□□ -1.18
NUP43-204ENST00000403890 UGT3A2Q3SY77 523 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 LIN52Q52LA3 116 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 MTX3Q5HYI7 312 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 C6orf136Q5SQH8 315 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 SLC35E4Q6ICL7 350 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 NLRC3Q7RTR2 1065 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 ZER1Q7Z7L7 766 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 ANKRD46Q86W74 232 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 VRK2Q86Y07 508 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 FNDC5Q8NAU1 212 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 HIPK4Q8NE63 616 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 OR4K5Q8NGD3 323 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 OR8B3Q8NGG8 313 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 OR52P1PQ8NH57 321 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 SLC41A3Q96GZ6 507 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 OR8B2Q96RD0 313 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 RHOXF2Q9BQY4 288 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 TOR3AQ9H497 397 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 GLTPQ9NZD2 209 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 USH1CQ9Y6N9 552 aa7.68□□□□□ -1.18
NUP43-204ENST00000403890 EPPK1P58107 5090 aaKnown RBP7.68□□□□□ -1.18
NUP43-204ENST00000403890 DNAH3Q8TD57 4116 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 TRAV36DV7A0A075B6V5 113 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 A0A0U1RQK1 487 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 A0A1W2PPM1 405 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 RNASEK-C17orf49H0YIS7 233 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 H3BSA7 217 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 IFNL4K9M1U5 179 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 SURF4O15260 269 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 TIMM8AO60220 97 aaPredicted RBP7.67□□□□□ -1.18
NUP43-204ENST00000403890 MGRN1O60291 552 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 TRIM13O60858 407 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 TOX4O94842 621 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 G6PDP11413 515 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 AHCYP23526 432 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 STOMP27105 288 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 CFHR2P36980 270 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 WNT5AP41221 380 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 TXNL4AP83876 142 aaKnown RBP7.67□□□□□ -1.18
NUP43-204ENST00000403890 HSF2Q03933 536 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 PUDPQ08623 228 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 ANXA8L1Q5VT79 327 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 RNF220Q5VTB9 566 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 C11orf88Q6PI97 169 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 LRFN4Q6PJG9 635 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 ZNF836Q6ZNA1 936 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 PXKQ7Z7A4 578 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 SERPINA11Q86U17 422 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 CLIP4Q8N3C7 705 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 SCAIQ8N9R8 606 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 SCCPDHQ8NBX0 429 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 OR2Z1Q8NG97 314 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 OR8J2Q8NGG1 315 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 VANGL1Q8TAA9 524 aaPredicted RBP7.67□□□□□ -1.18
NUP43-204ENST00000403890 ITLN1Q8WWA0 313 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 TMEM54Q969K7 222 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 B9D2Q9BPU9 175 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 SLC35A5Q9BS91 424 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 CDADC1Q9BWV3 514 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 ASPNQ9BXN1 380 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 ARMC7Q9H6L4 198 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 PPCSQ9HAB8 311 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 KLHL14Q9P2G3 628 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 CLN8Q9UBY8 286 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 IL19Q9UHD0 177 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 VPREB3Q9UKI3 123 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 FOXJ3Q9UPW0 622 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 FAM96BQ9Y3D0 163 aa7.67□□□□□ -1.18
NUP43-204ENST00000403890 KRTAP4-8A0A0G2JLE6 195 aa7.66□□□□□ -1.18
NUP43-204ENST00000403890 C5orf49A4QMS7 147 aa7.66□□□□□ -1.18
NUP43-204ENST00000403890 ANKRD61A6NGH8 418 aa7.66□□□□□ -1.18
NUP43-204ENST00000403890 TMEM233B4DJY2 109 aa7.66□□□□□ -1.18
NUP43-204ENST00000403890 ZNF879B4DU55 563 aa7.66□□□□□ -1.18
NUP43-204ENST00000403890 PLIN3O60664 434 aa7.66□□□□□ -1.18
NUP43-204ENST00000403890 SERPINI2O75830 405 aa7.66□□□□□ -1.18
NUP43-204ENST00000403890 ZNF205O95201 554 aa7.66□□□□□ -1.18
NUP43-204ENST00000403890 C1QCP02747 245 aa7.66□□□□□ -1.18
NUP43-204ENST00000403890 LIPFP07098 398 aa7.66□□□□□ -1.18
NUP43-204ENST00000403890 MMP7P09237 267 aaPredicted RBP7.66□□□□□ -1.18
NUP43-204ENST00000403890 GCAP28676 217 aa7.66□□□□□ -1.18
NUP43-204ENST00000403890 BIDP55957 195 aa7.66□□□□□ -1.18
NUP43-204ENST00000403890 PPP1CBP62140 327 aa7.66□□□□□ -1.18
NUP43-204ENST00000403890 MAD2L1Q13257 205 aaPredicted RBP7.66□□□□□ -1.18
NUP43-204ENST00000403890 NSUN5P1Q3KNT7 163 aa7.66□□□□□ -1.18
NUP43-204ENST00000403890 PABPC1L2AQ5JQF8 200 aa7.66□□□□□ -1.18
NUP43-204ENST00000403890 WDR25Q64LD2 544 aaPredicted RBP7.66□□□□□ -1.18
NUP43-204ENST00000403890 LRRC34Q8IZ02 419 aa7.66□□□□□ -1.18
NUP43-204ENST00000403890 C17orf53Q8N3J3 647 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms